| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3419 |
|---|
| Symbol | |
|---|
| ID | 3368946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 4082060 |
|---|
| End bp | 4083472 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637653770 |
|---|
| Product | 4Fe-4S ferredoxin, iron-sulfur binding |
|---|
| Protein accession | YP_236489 |
|---|
| Protein GI | 66046648 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0348] Polyferredoxin |
|---|
| TIGRFAM ID | [TIGR02745] cytochrome c oxidase accessory protein FixG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0724088 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0680698 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGC AGATTCCAGT ACACGACATC ACCCCGGCAT CTGAAACAGG CGGCGAATTC
ACCGACCTCT ATGCTTCGCG CGAGAAGATC CAGACCCGCG CGTTCAAAGG CCTGTTTCGA
AACGTGCGGA TGCTCGGCGG CGCCCTGTTG CTGCTGATCT TTTTCGGCAC GGTCTGGCTG
AATCGCAGCG GGCATCAGGC GGTCTGGTGG AACCTGCCGG AACGCAAGTT CTACATCTTC
GGTGCAACGT TCTGGCCGCA GGATTTCATC CTCTTGTCCG GCATTCTGAT CGTTGCAGCG
TTCGGGCTGT TCTTCATCAC CGTCTATGCC GGGCGGGTCT GGTGTGGCTA TACCTGCCCG
CAGAGTGTCT GGACCTGGAT CTTCATGTGG TGCGAGAAAG TGACTGAAGG CGACCGCAAC
CAGCGCATCA GGCTCGACCA CGCCTCGATG AGTGCCGGCA AACTGCTGCG CAAGTTCGCC
AAACACAGCC TGTGGCTGCT GATCGGGTTT GCCACCGGTA TGACCTTCGT GGGGTATTTC
TCACCCATCC GCGCGCTGTG CGTGGATCTG TTCACGGGCC AGGCGGATGG CTGGGCCTAT
TTCTGGGTCG GTTTCTTTAC CTTGGCCACT TACCTTAATG CCGGCTGGCT GCGCGAGCAG
GTATGCATTT ACATGTGTCC CTATGCGCGG TTCCAGAGCG TGATGTTCGA CAAGGACACG
CTGATCATCT CCTACGACCA GAATCGTGGC GAAGCCCGAG GTCCGCGCAA GAAGGAGGCC
GATCCTCAGG CACTGGGGCT GGGTGACTGC ATCGACTGCA CGATGTGCGT GCAGGTCTGC
CCGACCGGCA TCGACATTCG TGACGGCCTG CAGGTGGAGT GCATCAGCTG CGCGGCGTGC
GTCGATGCCT GCGATACGGT CATGGACAAG ATGGATTACC CTCGCGGCCT GATTCGCTAC
ACCACCGAAC ACAACCTGTC CGGGCAACGC ACCCGCACCC TGCGCCCGCG TCTGATCGGT
TATGCGCTGG TCCTGCTGCT GATGATTGCG CTGTTGACCG CGGCGTTCTG CATGCGCACG
CTGGTGGGTC TGGAGGTCAG CAAGGACCGC ATGCTGTTCC GGGAAAACGC CGAAGGCCGG
ATCGAGAACG TCTACAGCCT GAAAGTGATG AACAAGGATC AGGTTGACCA CGCCTATGTG
TTGCAGGCCA GCGGCCTGCC CGACCTGAAA CTGCAGGGCC GTCGGAAAAT CAGCGTACCG
GCGGGTGAAA TCGTCAGCCT GCCGGTGGAG CTGTCCAGTG CGCCGGAAAA ACTGCCGTCG
CACAGCAACG AGGTCACCTT TACCCTCAAG GATATCGACA GCGATGCACA GGTCGAGACC
CAAAGCCGCT TCCTTGGCCC ACCTATTCGT TAA
|
|---|
| Protein sequence | MTKQIPVHDI TPASETGGEF TDLYASREKI QTRAFKGLFR NVRMLGGALL LLIFFGTVWL
NRSGHQAVWW NLPERKFYIF GATFWPQDFI LLSGILIVAA FGLFFITVYA GRVWCGYTCP
QSVWTWIFMW CEKVTEGDRN QRIRLDHASM SAGKLLRKFA KHSLWLLIGF ATGMTFVGYF
SPIRALCVDL FTGQADGWAY FWVGFFTLAT YLNAGWLREQ VCIYMCPYAR FQSVMFDKDT
LIISYDQNRG EARGPRKKEA DPQALGLGDC IDCTMCVQVC PTGIDIRDGL QVECISCAAC
VDACDTVMDK MDYPRGLIRY TTEHNLSGQR TRTLRPRLIG YALVLLLMIA LLTAAFCMRT
LVGLEVSKDR MLFRENAEGR IENVYSLKVM NKDQVDHAYV LQASGLPDLK LQGRRKISVP
AGEIVSLPVE LSSAPEKLPS HSNEVTFTLK DIDSDAQVET QSRFLGPPIR
|
|---|
| |