Gene Psyr_3418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3418 
Symbol 
ID3368945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4081543 
End bp4081995 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content58% 
IMG OID637653769 
ProductPilT protein, N-terminal 
Protein accessionYP_236488 
Protein GI66046647 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.317439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0554428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTGC TCGACACCAA CGTGGTTTCA GAGCTCAGAA AGCGCACTGC AGACGCCAAT 
GTGCTGCGCT GGTCGCGAAC ACAAATGGCC TCCAGCCTGT TCATCTCGTC CATCACGATT
CTTGAACTCG AAACAGGTAT CCTGCGCATC GAACGCCGCG ACCCGACACA AGGCGCAATA
TTGCGAATGT GGCTCGACCA GCATGTATTG AAGGCGTTCG CCGGGCGTAT CCTGACCGTC
GACATTCAGG TCGCTAGGCG CTGCGCGCAA TTGCACGTTC CCGACCCGCG CAGCGAATGC
GATGCGTTGA TCGCCGCCAC TGCGCTGGTG CATGGCATGA CCGTGGTCAC ACGCAACACA
ATGGACTTTC AGTCGTGCGG GGTCGCGCTG CTCAATCCCT GGGTCAGCCA GTTGAATGAA
GAAGCGGCCG TTTATTCACG TGCAGCACGT TGA
 
Protein sequence
MFLLDTNVVS ELRKRTADAN VLRWSRTQMA SSLFISSITI LELETGILRI ERRDPTQGAI 
LRMWLDQHVL KAFAGRILTV DIQVARRCAQ LHVPDPRSEC DALIAATALV HGMTVVTRNT
MDFQSCGVAL LNPWVSQLNE EAAVYSRAAR