Gene Psyr_3403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3403 
Symbol 
ID3368930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4061045 
End bp4062118 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content63% 
IMG OID637653754 
Productputative RNA 2'-O-ribose methyltransferase 
Protein accessionYP_236473 
Protein GI66046632 
COG category[R] General function prediction only 
COG ID[COG2933] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.636582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAC TGTTTATGCA CTGCCGACCC GGTTTTGAGG GCGAAGTCTG CTCGGAAATA 
GCCGATCACG CCGCGCGCCT GGACGTGGCC GGGTATGCCA AGGCCCGTCC CGACACGGCT
TGCGCCGAAT TCATCTGCAC CGAGGCGGAT GGCGCCGAAC GGTTGATGAA CGGTCAGCGC
TTCGACAAGC TGATATTTCC CCGGCAGTGG GCGCGGGGGC TGTTTCTCGA GTTGCCGGAA
ACCGATCGCA TCAGCGTGAT TCTCGCGCAG CTGGCGGCGT TCCCGATTTG CGGCAGTCTG
TGGCTGGAGG TCGTGGATAC CAACGACGGC AAGGAGCTGT CGAATTTCTG CAAGAAGTTC
GAGGCGCCGC TGCGCAAGGC CCTGACTCAG GCAGGCAAAC TGGTGGATGA TCCGCGCAAG
CCGCGTCTGC TGCTGACCTT CAAGAGTGGT CGCGAGGTGT TTCTCGGTCT GGCCGATGCG
GACAACTCCG CCATGTGGCC GATGGGCATC CCGCGCCTCA AGTTTCCCCG CGAAGCGCCA
AGCCGCTCGA CCCTGAAGCT TGAAGAGGCC TGGCACCACT TCATTCCCAG AGACCAGTGG
GACGAGCGCC TTTCCGGCGA CATGACCAGC GTGGACCTGG GTGCCGCGCC GGGCGGCTGG
ACGTATCAAC TGGTGCGCCG CGGCATGCTG GTGACCGCCA TCGATAACGG GCCGATGGCG
GAAAGCCTGA TGGACACCGG GCTGGTGCAG CATCTGATGG CGGACGGTTT TACCTACAAG
CCTCGACAGC CTGTGGACTG GATGGTCTGC GACATCGTCG AAAAGCCTGC GCGTAATGCA
GCCCTGCTGG AAACCTGGCT GGGTGAAGGC CTGTGCCGCG AAGCGGTGGT CAACCTCAAG
TTGCCTATGA AACAGCGCTA CGCTGAAGTG CGCCGACTGC TCGACCGTAT CGAAGAGGGC
TTTCAGGCGC GAGGGGTGCG GGTGTCCATC GGCTGCAAAC AGCTCTACCA CGACCGCGAA
GAAGTCACCT GCCACCTGCG CAGGCTGGAC GTGGCCAAAG CGGCGAGGAA GTGA
 
Protein sequence
MNTLFMHCRP GFEGEVCSEI ADHAARLDVA GYAKARPDTA CAEFICTEAD GAERLMNGQR 
FDKLIFPRQW ARGLFLELPE TDRISVILAQ LAAFPICGSL WLEVVDTNDG KELSNFCKKF
EAPLRKALTQ AGKLVDDPRK PRLLLTFKSG REVFLGLADA DNSAMWPMGI PRLKFPREAP
SRSTLKLEEA WHHFIPRDQW DERLSGDMTS VDLGAAPGGW TYQLVRRGML VTAIDNGPMA
ESLMDTGLVQ HLMADGFTYK PRQPVDWMVC DIVEKPARNA ALLETWLGEG LCREAVVNLK
LPMKQRYAEV RRLLDRIEEG FQARGVRVSI GCKQLYHDRE EVTCHLRRLD VAKAARK