Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3396 |
Symbol | recR |
ID | 3368923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4053568 |
End bp | 4054170 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637653747 |
Product | recombination protein RecR |
Protein accession | YP_236466 |
Protein GI | 66046625 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00615] recombination protein RecR |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0105717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTCA GCCCCCTGAT TCGCCAGTTG ATCGATGCCT TCCGCGTGCT GCCGGGCGTC GGTCAGAAAA CCGCTCAGCG CATGGCGTTG CAGTTGCTGG AGCGCGACCG CAGCGGCGGT TCGCGGCTGG CGCAGGCACT GGGGCAGGCG ATGGACGGCG TGGGTCACTG CCGCTCGTGC CGCACGCTGA CCGAAGAGGA GCTCTGCCCG CAATGCGCAG ACCCGCGGCG TGATGACACG CTGCTGTGTG TGGTCGAAGG CCCGACGGAT GTCTATGCGG TGGAGCAGAC TGGCTACCGC GGTCGTTACT TCGTGCTCAA GGGCCATCTG TCGCCACTCG ACGGCCTGGG ACCGGAGGCC ATCGGCATTC CGCAATTGAT GGAGCGCATC AGCCAGCAGG GCACCTTTAC CGAGGTGATC CTCGCCACCA ATCCGACCGT GGAAGGCGAA GCGACGGCGC ATTACATCGC TCAACTGCTC CACGACAAGG GCCTGGTCGC GTCGCGCATT GCTCACGGCG TTCCGTTGGG TGGCGAGCTG GACCTGGTCG ACGGTGGCAC GCTGGCGCAT TCGTTTGCAG GGCGCAAACC GATTGCAATG TGA
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Protein sequence | MSFSPLIRQL IDAFRVLPGV GQKTAQRMAL QLLERDRSGG SRLAQALGQA MDGVGHCRSC RTLTEEELCP QCADPRRDDT LLCVVEGPTD VYAVEQTGYR GRYFVLKGHL SPLDGLGPEA IGIPQLMERI SQQGTFTEVI LATNPTVEGE ATAHYIAQLL HDKGLVASRI AHGVPLGGEL DLVDGGTLAH SFAGRKPIAM
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