| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3345 |
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| Symbol | |
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| ID | 3368872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4000347 |
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| End bp | 4002464 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637653696 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_236415 |
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| Protein GI | 66046574 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0305411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCACTT CCTTCCAATG CCCTCGCCGT CCCGGCTCTT TTCTGCTGTC CGCGCTTTCT
CTGGCGATGT TCTCCGGCGG CGCAGTGCAT GCTGCCGAAA CCGCAACGCT GCCCGCTACG
CAGGTGTCGG CAACCGCGAC CGAAGCGCAG GAAGGCTACA GCGCCAAAAG CGCCAGCACT
GCGAGCAAGA GTGACGTACC GCTCAAGGAA GAAGCGCAGT CGGTCAACGT GGTGACACCG
CAAACCATCG CCGACTACAA CGTGCGCTCG CTGGACGATG CCATGAAGTT TGTCAGTGGT
GTCAGCCAGG GCAATACCCT TGGCAATACC AAGGACTCGC TGGTCAAGCG CGGCTTTGGC
ACCAACGATG ATGGCTCGGT GCTGCGTGAC GGCGTGCGCT CGGTGATGTC GAAAAATTTC
GGTGCCACTA CCGAACGCGT TGAAGTGCTC AAAGGCCCGG CCTCGCTGCT GTACGGGGCG
ATGGAGCCGG GTGGCGTGAT CAATGTGATC AGCAAACAGC CGCAATACGT GCAAAGCACC
ACGCTCAGTG GCTCGGCGTA CAGCGAAGGC GGCGGCAGCT TCGGCATCGA CACCACCGGC
CCGCTGGGTG ACTCGGGGCT GGCCTACCGC CTGGTGGCCG AGCGTCAGAG CGAGGACTAC
TGGCGTAACT ATGGCGTTGA CCAGCACACG CTGGTCGCGC CGTCGCTGTC CTGGACCGGG
GAGCGCGCCA GCCTGACGCT GGCTTACGAG TACAACGATT ACGTCAGCCC GTTCGATCGT
GGCACGGTGT TCACCGGCGG TCATCCGGCC GATATCAGCT ACGACAAGCG CCTGGACGAA
AAATGGGCAA ATACGGTCGG CATCAGCGAA ACCGCTACCG CACGCTTCGA GTACCAGCTC
AGCGATGACT GGAAAACCCG CCTGACCTAC GGCTGGAACA ACGACCGCTA CAGCCTCTCG
ATTGCCCAGC CGAGCACGCT GTCCAGCAGC GGCGTGCTGC GACGCCAGGC CAATGGCGGC
CATTACGATT ATGAAACGCG TTATGCCAGC TGGGACTTCA TCGGCAAGCA GGAGGTGTTT
GGCCAGCAAC ATGATCTGCT GATCGGTGCC GAGCAGGAGG ATTCCGACAA GTACCGCGGC
AAGACTTACC GCAATGGCGT ACAGGGTGGC TTCAATATCT TTTCGCCCAG CTACGGCAGC
CTGGCGGAGC CCAGTGTTGT CAGTACGACC ACCAGCAACC TGAGCAATCA ACTGACCTCA
TCGTCCATCT ACCTCAAGGA CAACTGGCAT CTTGATGACC GCTGGATTCT GGTCCTGGGC
GGCCGCTATC AGCATTATGA CCAGCACATC GCCCAAGGCC TCGGCGCCAG CCGCAACACT
AATCTGAACA AAAATGACGA TATATTCCTG CCGATGGCGG GACTGGTATT CAAGGTCAAT
GAGGACCTGT CGTTGTACGG CAACTACAGC CGCTCTTTCG TCCCCAATGA GGCGGTTAAC
GATGACGGCA CCACCTTCGA CCCGGAAGAA GGCCGCAGCT ACGAAGTCGG CGCCAAATAT
GCGCTGGCAC CGGAACTCGA CTTCAACCTC GCCGTGTTTG ACATAGAGAA GAAAAATGTT
GTGACCACCG TTGCTACCGG CGTCAGCGAA GCGGCTGGCA AAGTGGGTTC ACAGGGCGTG
GAGCTGGACG TGACCGGTCG AATTGCCGAG CGCTGGGACA TGATCGGCAC TTATGCCTAC
ACACATACCG AAGTGCTTGA TGACCCCAAA AACGAGGGCA ACCGTTTGAG TCAGGCACCG
AAACATACCG CCAGCCTGTA TCTCACCCAT CACCTGCAAG TCCCGTCCGG TCTGGGCGAA
TGGCATGCCG GTGGTGGCGC GCGCTATGTC GGCGATAGGG CGGGTGACAA CGCAAACACG
TTCTACATGA GCAGCTACAC CGTGGCTGAT GCGTTCCTGC GCTGGGATGT GCCAATGGCA
GGTTATAAAA CCCGCCTTCA ATTGAACGTG GATAACCTGT TCGACAAGCA GTACTACCCG
TCCAGTACCG ACAGCCCGTT GCAGGTCAAT GTGGGTGAAC CACGCACCGC ACGCCTGAGC
GCCAGCGTCA CGTTCTAA
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| Protein sequence | MSTSFQCPRR PGSFLLSALS LAMFSGGAVH AAETATLPAT QVSATATEAQ EGYSAKSAST
ASKSDVPLKE EAQSVNVVTP QTIADYNVRS LDDAMKFVSG VSQGNTLGNT KDSLVKRGFG
TNDDGSVLRD GVRSVMSKNF GATTERVEVL KGPASLLYGA MEPGGVINVI SKQPQYVQST
TLSGSAYSEG GGSFGIDTTG PLGDSGLAYR LVAERQSEDY WRNYGVDQHT LVAPSLSWTG
ERASLTLAYE YNDYVSPFDR GTVFTGGHPA DISYDKRLDE KWANTVGISE TATARFEYQL
SDDWKTRLTY GWNNDRYSLS IAQPSTLSSS GVLRRQANGG HYDYETRYAS WDFIGKQEVF
GQQHDLLIGA EQEDSDKYRG KTYRNGVQGG FNIFSPSYGS LAEPSVVSTT TSNLSNQLTS
SSIYLKDNWH LDDRWILVLG GRYQHYDQHI AQGLGASRNT NLNKNDDIFL PMAGLVFKVN
EDLSLYGNYS RSFVPNEAVN DDGTTFDPEE GRSYEVGAKY ALAPELDFNL AVFDIEKKNV
VTTVATGVSE AAGKVGSQGV ELDVTGRIAE RWDMIGTYAY THTEVLDDPK NEGNRLSQAP
KHTASLYLTH HLQVPSGLGE WHAGGGARYV GDRAGDNANT FYMSSYTVAD AFLRWDVPMA
GYKTRLQLNV DNLFDKQYYP SSTDSPLQVN VGEPRTARLS ASVTF
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