Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3344 |
Symbol | |
ID | 3368871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3999241 |
End bp | 4000131 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637653695 |
Product | hypothetical protein |
Protein accession | YP_236414 |
Protein GI | 66046573 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00702344 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAACCA TCATTCTTGG CCTGCCCGTC GGCTGTGCAG TGCTTGAACA CAAGGAGCGC CAACTGGTGT TTCGCATCGA GCCCGGTACC GCCAGCTGGT ACAGCGGTCT GCCGGCAGAT GTGCAGGAAA TCGAACTCAG TACACCGGCA TTCGGTACCT CGCAGAATAT CCACGCATGG TGGTGGCCCG CTGCGGACAA GAACGCCCCG GCGGTGTTGT ACCTGCATGG ATCACGATGG AACCTCACCG GCCAGCTGTT CCGTATCCAG CAACTCAAGG CACAGGGCTA CTCGATACTG GCGATCGATT ACCGGGGTTT CGGGCAAAGC ATGGGCCAAC TGCCTTCGGA AAGGTCTGTA TATGAAGACG CACGCATCGC CTGGGAACGC CTGAAGCAAT TGCAACCCGA CCCGCAGCGC AGGCTGATTT ATGGACACTC TCTGGGCGGT GCGGTGGCAG TGGATCTGGC TGCCGAGCTG GGCGAAGACG CTGAAAAGGA CAATGCACCC ATTCAGGCCC GCGGGCTGAT CATCGAATCC ACGTTCACCA ACCTCGCCGA TGTGGCCACC GCGCTTGCCA ACACATCGTT GCCGGTGCGT TGGCTGCTGT CGCAGAAGTT CGACTCGCTG GACAAGATTG CAGACATCCA TATGCCGGTG CTGATCGTGC ACGGCACCGA GGATCGCTAT GTACCGGCAC GCTTCAGCGA ACAGTTGTTT GAGGCCGCGC AGGAACCGAA GAAACTGCTA CTGGTGCCTG GCGGTACGCA TAACAACAGC ATGCAGCTCG GGCAGCCCGC TTACAGCCAG GCCATTCGTG CCCTGCTCGA TACACCCGCA TCGCTGCCTC AGGTAACACA ACAGGGCAAG GACTCGAAGA ACGCCGGTTA G
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Protein sequence | MTTIILGLPV GCAVLEHKER QLVFRIEPGT ASWYSGLPAD VQEIELSTPA FGTSQNIHAW WWPAADKNAP AVLYLHGSRW NLTGQLFRIQ QLKAQGYSIL AIDYRGFGQS MGQLPSERSV YEDARIAWER LKQLQPDPQR RLIYGHSLGG AVAVDLAAEL GEDAEKDNAP IQARGLIIES TFTNLADVAT ALANTSLPVR WLLSQKFDSL DKIADIHMPV LIVHGTEDRY VPARFSEQLF EAAQEPKKLL LVPGGTHNNS MQLGQPAYSQ AIRALLDTPA SLPQVTQQGK DSKNAG
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