Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3343 |
Symbol | |
ID | 3368870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3998323 |
End bp | 3998820 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637653694 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_236413 |
Protein GI | 66046572 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00591936 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTCACTC ACCGTCCCCT GAAAGAAAAA GACGTCCCTC TCATCTGCAA GCTGCCGCAG GATGCCGATG AGCTGTTCTA CATGTTCCCC AGGGCAACGT ACCCGTTGAC TGCCTCACAA CTCAGTGAAG CGCTTCAAAC GCGCCATGAC TCGACCGTCA TCGAAATGGA CGGTGAGGTG GTAGGCTTTG CCAATTTCTC TCACTGCACC TTTCGCGGTC GCTGTTCGCT GGGCAACGTC ATCATCGCAC CGAAGGCCCG GTCCAGAGGG GTAGGGCGCT TCATGATCAC CACCATGATG GGGATCGCGT TCGACAAGCA CGAAGCGAGC GAAATGATCG CGTCGTGCTT CAACCACAAC GTGCCAGGCT TGCTGTTCTA CCCGCGGATG GGGTTTCGTC CGTTCCACAT TGAAGAAAAG CGCGATAAGC GCGGCGAGCG TGTTGCGCTG ATTCATCTGC GGCTGTCCGG CAAGGACCTG GAACATACAC AAGAGTAA
|
Protein sequence | MFTHRPLKEK DVPLICKLPQ DADELFYMFP RATYPLTASQ LSEALQTRHD STVIEMDGEV VGFANFSHCT FRGRCSLGNV IIAPKARSRG VGRFMITTMM GIAFDKHEAS EMIASCFNHN VPGLLFYPRM GFRPFHIEEK RDKRGERVAL IHLRLSGKDL EHTQE
|
| |