Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3330 |
Symbol | |
ID | 3368857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3984231 |
End bp | 3985307 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637653681 |
Product | 4-hydroxyphenylpyruvate dioxygenase |
Protein accession | YP_236400 |
Protein GI | 66046559 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000135901 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCTGATC TTTACGAAAA TCCAATGGGC CTGATGGGCT TTGAATTCAT CGAATTCGCA TCACCGACGC CCAATAGCCT TGAGCCCGTG TTTCAGATGA TGGGCTTCAC CAAAGTCGCG ACCCACCGCT CCAAGGACGT GTCCCTGTAT CGTCAGGGCG CGATCAACCT GATTCTCAAC AACGAGCCGC ATAGTCTGGC ATCGTACTTT GCCGCCGAGC ATGGTCCTTC GGTGTGCGGC ATGGCGTTCC GCGTGAAAGA TGCGCAGAAG GCCTATAGCC GGGCGCTTGA ACTGGGCGCC CAACCGCTGG AAATCGCTAC CGGGCCCATG GAGTTGCGCC TGCCCGCCAT CAAGGGCATC GGTGGCGCGC CGCTTTACCT GATCGATCGC TTCGGCGAGG GCACGTCGAT CTACGACATC GATTTCAACT TCATCGAGGG CGTTGACCGC CACCCGGTCG GTGCCGGTCT GAAATTCATC GACCACCTGA CCCACAACGT GTACCGCGGG CGCATGGCGT ATTGGGCCGG TTTCTATGAA AAGCTGTTCA ATTTCCGCGA GCTGCGTTAC TTCGACATCA AGGGCGAATA CACCGGCCTG ACCTCCAAAG CCATGACCGC CCCGGACGGC ATGATCCGCA TTCCGCTCAA CGAAGAATCG TCCAAGGGCG CGGGGCAGAT CGAAGAGTTC CTGATGCAGT TCAATGGCGA AGGCATTCAG CATGTAGCCT TCTTCACCGA TGACCTGATC AAGACCTGGG ACGCGCTGAA AGCCACCGGC ATGCGCTTCA TGACTGCGCC GCCGGATACC TACTACGAGA TGCTGCAAGG CCGCCTGCCC GACCACGGTG AGCCGGAGGC CGAGCTCAAG TCACGCGGGA TTCTGCTCGA TGGTTCTTCC GAAGGCGGCG AGCGTCGTTT GCTGTTGCAG ATATTCTCCG CAACGCTGAT GGGCCCGGTA TTTTTCGAAT TCATTCAGCG CAAGGGCGAT GACGGGTTTG GCGAGGGCAA CTTCAAGGCA CTGTTCGAAT CCATCGAACG CGACCAGATC CAGCGTGGTG TACTGACGCC GGACTGA
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Protein sequence | MADLYENPMG LMGFEFIEFA SPTPNSLEPV FQMMGFTKVA THRSKDVSLY RQGAINLILN NEPHSLASYF AAEHGPSVCG MAFRVKDAQK AYSRALELGA QPLEIATGPM ELRLPAIKGI GGAPLYLIDR FGEGTSIYDI DFNFIEGVDR HPVGAGLKFI DHLTHNVYRG RMAYWAGFYE KLFNFRELRY FDIKGEYTGL TSKAMTAPDG MIRIPLNEES SKGAGQIEEF LMQFNGEGIQ HVAFFTDDLI KTWDALKATG MRFMTAPPDT YYEMLQGRLP DHGEPEAELK SRGILLDGSS EGGERRLLLQ IFSATLMGPV FFEFIQRKGD DGFGEGNFKA LFESIERDQI QRGVLTPD
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