Gene Psyr_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3330 
Symbol 
ID3368857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3984231 
End bp3985307 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content58% 
IMG OID637653681 
Product4-hydroxyphenylpyruvate dioxygenase 
Protein accessionYP_236400 
Protein GI66046559 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR01263] 4-hydroxyphenylpyruvate dioxygenase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000135901 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTGATC TTTACGAAAA TCCAATGGGC CTGATGGGCT TTGAATTCAT CGAATTCGCA 
TCACCGACGC CCAATAGCCT TGAGCCCGTG TTTCAGATGA TGGGCTTCAC CAAAGTCGCG
ACCCACCGCT CCAAGGACGT GTCCCTGTAT CGTCAGGGCG CGATCAACCT GATTCTCAAC
AACGAGCCGC ATAGTCTGGC ATCGTACTTT GCCGCCGAGC ATGGTCCTTC GGTGTGCGGC
ATGGCGTTCC GCGTGAAAGA TGCGCAGAAG GCCTATAGCC GGGCGCTTGA ACTGGGCGCC
CAACCGCTGG AAATCGCTAC CGGGCCCATG GAGTTGCGCC TGCCCGCCAT CAAGGGCATC
GGTGGCGCGC CGCTTTACCT GATCGATCGC TTCGGCGAGG GCACGTCGAT CTACGACATC
GATTTCAACT TCATCGAGGG CGTTGACCGC CACCCGGTCG GTGCCGGTCT GAAATTCATC
GACCACCTGA CCCACAACGT GTACCGCGGG CGCATGGCGT ATTGGGCCGG TTTCTATGAA
AAGCTGTTCA ATTTCCGCGA GCTGCGTTAC TTCGACATCA AGGGCGAATA CACCGGCCTG
ACCTCCAAAG CCATGACCGC CCCGGACGGC ATGATCCGCA TTCCGCTCAA CGAAGAATCG
TCCAAGGGCG CGGGGCAGAT CGAAGAGTTC CTGATGCAGT TCAATGGCGA AGGCATTCAG
CATGTAGCCT TCTTCACCGA TGACCTGATC AAGACCTGGG ACGCGCTGAA AGCCACCGGC
ATGCGCTTCA TGACTGCGCC GCCGGATACC TACTACGAGA TGCTGCAAGG CCGCCTGCCC
GACCACGGTG AGCCGGAGGC CGAGCTCAAG TCACGCGGGA TTCTGCTCGA TGGTTCTTCC
GAAGGCGGCG AGCGTCGTTT GCTGTTGCAG ATATTCTCCG CAACGCTGAT GGGCCCGGTA
TTTTTCGAAT TCATTCAGCG CAAGGGCGAT GACGGGTTTG GCGAGGGCAA CTTCAAGGCA
CTGTTCGAAT CCATCGAACG CGACCAGATC CAGCGTGGTG TACTGACGCC GGACTGA
 
Protein sequence
MADLYENPMG LMGFEFIEFA SPTPNSLEPV FQMMGFTKVA THRSKDVSLY RQGAINLILN 
NEPHSLASYF AAEHGPSVCG MAFRVKDAQK AYSRALELGA QPLEIATGPM ELRLPAIKGI
GGAPLYLIDR FGEGTSIYDI DFNFIEGVDR HPVGAGLKFI DHLTHNVYRG RMAYWAGFYE
KLFNFRELRY FDIKGEYTGL TSKAMTAPDG MIRIPLNEES SKGAGQIEEF LMQFNGEGIQ
HVAFFTDDLI KTWDALKATG MRFMTAPPDT YYEMLQGRLP DHGEPEAELK SRGILLDGSS
EGGERRLLLQ IFSATLMGPV FFEFIQRKGD DGFGEGNFKA LFESIERDQI QRGVLTPD