Gene Psyr_3323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3323 
Symbol 
ID3368850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3974587 
End bp3975678 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content61% 
IMG OID637653674 
Producthypothetical protein 
Protein accessionYP_236393 
Protein GI66046552 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.992369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0935261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCGA CACATCAGAA AAAGTACGCT TCTTCACTGC CTGTCTTGTC CCGCCACGCA 
GGGCGATACC GCAATCATGC GGCCATGAAG CCGTCGAGTC TGCTGCGCAC GCTCGGGATT
TTCTGGGATC AGGTGTTCAA CAAGCCCAAG GACACACGCC CGGCAGGCGA CATTCCGGTA
CAGCCGCTGT CGCGTCAACA GTTGCTGGCA GCGCCGAACA ACACTGTTTA CCGCCTGGGG
CATTCGACCG TTCTGCTCAA ACTGCGCGAC CAGTTCTGGC TGACCGACCC CGTGTTTGCC
GAGCGTGCCT CGCCCGTGCA GTGGGCTGGC CCGCAGCGCT TTCATCAGCC GCCGATCAGC
CTCGAAGAGT TGCCGCCGAT CAAGGCGGTG ATTCTTTCGC ACAACCATTA CGATCACCTC
GATCGCATGG CCATCAAGGC GCTGACCGAA AAGACCGAGC ACTTTCTGGC GCCGCTTGGC
GTGGGCGATA CGTTGATCGA GTGGGGCGTG CCTGCGCACA AGGTGCGTCA GCTGGACTGG
TGGCAGTCGA CCGAGGTGGC GGGCATCGAG TTCGTCGCCA CGCCCTCGCA GCATTTCTCG
GGGCGTACGC TGCTCGACAG CAACCGCACC TTGTGGGCGT CCTGGGTGAT GATCGATGGC
GATCAACGGA TCTTCTTCAG TGGCGACAGC GGTTACTTCG ATGGTTTCAA AACCATTGGC
GAGCAATACG GACCATTTGA CCTGACCCTG ATGGAAACCG GCGCCTACAA CGTCGAGTGG
CCCGATGTGC ACATGCAGCC CGAGCAGACG CTGCAGGCGC ACCTGGACCT GCGCGGTCGC
TGGTTGCTGC CGATCCACAA CGGCACCTTC GACCTGTCGA TGCATGCCTG GCACGAACCG
TTCGATCGCA TTCTGGCCCT GGCCTGGGAG CAGAATGTCT CGATCGCCAC GCCGATGATG
GGCCAGCCGT TCTATGTGCA ATACCCGTGT CGCGGTCTGA CCTGGTGGCT GGGCGTGGAT
GAGGTGGTTG AGCCTGAAAC CGCACAGACC GAGGGTGCAG AATCCTGCGG CTGCCGTCGG
CAGAATGCCT GA
 
Protein sequence
MASTHQKKYA SSLPVLSRHA GRYRNHAAMK PSSLLRTLGI FWDQVFNKPK DTRPAGDIPV 
QPLSRQQLLA APNNTVYRLG HSTVLLKLRD QFWLTDPVFA ERASPVQWAG PQRFHQPPIS
LEELPPIKAV ILSHNHYDHL DRMAIKALTE KTEHFLAPLG VGDTLIEWGV PAHKVRQLDW
WQSTEVAGIE FVATPSQHFS GRTLLDSNRT LWASWVMIDG DQRIFFSGDS GYFDGFKTIG
EQYGPFDLTL METGAYNVEW PDVHMQPEQT LQAHLDLRGR WLLPIHNGTF DLSMHAWHEP
FDRILALAWE QNVSIATPMM GQPFYVQYPC RGLTWWLGVD EVVEPETAQT EGAESCGCRR
QNA