Gene Psyr_3307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3307 
Symbol 
ID3368834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3958098 
End bp3959315 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content63% 
IMG OID637653658 
Productglycosyl transferase, group 1 
Protein accessionYP_236377 
Protein GI66046536 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.143388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCC TGTGGACACT CCCCTACCTG CCCTGGCCCA CCACCAGTGG TGGCAAGACC 
CGGGAATACC ATTTGTTGCG AAACCTGGCT GGGCGCGGTC ATCGCATCAC GCTGCTGGTG
CAGTCCAAGA ACCCGCTGGA CGACGACGCG CGCGCGGCAC TGGAGCCTTG GCTGGAACGC
CTGATCGTGA TCGAACGCCG CCCGCTGCTC AGCCTGCGTA CGCTGCTGGC TGTGGCCTTT
GCAGCGCCAC CGATGCTGGC CAGCGTGAAC GGCTACGCGC CACAACTGGA AAAAGCCTTC
GAGCAGTTGC TGAAGGAGGA CTGGGACATT ATCCAGTTGC AGCACACTTA TGCCTTTCAG
CCCTTCGAGC GCGCGCTCAA GCGCTCTGGC AAGCCCTTTG TGCTGACCGA GCACAATGTC
GAATCGGACC TGGGTGCCGC CAGCTACGAC CGTCTGCCGC GCTGGGCCAA TGCCTTCGCG
GTCTATGACC GCTGGCGCTA CCGGCGCTGG GAAACCCGCG TGTTTCGCCA GACCGGCGAG
TTGATCGCGG TCACCGAGGA CGATGCCAAG GTACTTTCGC GCCTGAGCGG CAGGGCCACG
TCCTATGTCG TCAACAGTGT CGACTGCGAT TACTACGCCA GCGTCCATGC GGACCGTCAC
AGCCATCGCC TGCTGTTCAT CGGCAACTAT GAATATGGCC CCAATGTCGA CGCCATCGAA
TGGGCGCTGG ACGAGATCAT GCCGCAGGTC TGGGCTCAGG CACCCCATGT ACGGTTTGCC
ATCGGCGGCT TCGGTATGCC TCAGACCTGG CGCGAGCGCT GGCCTGACCC ACGCATTGAA
TGGCTGGGTT TCGTACCTGA CCTGCGTGCC TTGCAAGCCA CTGCCTCGAT GTTCTTCGCG
CCCCTGCGCC AGGGTGGCGG CTCCAAGCTC AAGACGCTGG AAGCCATGGC TGCCGGCCTG
CCGGTGGTGA CCACCGCGCA GGGGGTTTCC GGGCTGACGG TGCGGCATGG CGAACATTAC
CTGGGCAGCG AGGATGCCGC CGGGCTGGCG GCACTGATCG CTGAATACAC CGATAAACCA
CTGCAGCTCG AGCAGATTGG CGAAGCCGGC CGCGTTTATG TGCGTGCCCG GCACGACTGG
TCCGTTTCGG CCGCTCAGCT GGAAGTGATC TACACCCGTT TTTCGTTCTC CAAGCAAGGA
TTGCGCTCAT GCGTATAG
 
Protein sequence
MRILWTLPYL PWPTTSGGKT REYHLLRNLA GRGHRITLLV QSKNPLDDDA RAALEPWLER 
LIVIERRPLL SLRTLLAVAF AAPPMLASVN GYAPQLEKAF EQLLKEDWDI IQLQHTYAFQ
PFERALKRSG KPFVLTEHNV ESDLGAASYD RLPRWANAFA VYDRWRYRRW ETRVFRQTGE
LIAVTEDDAK VLSRLSGRAT SYVVNSVDCD YYASVHADRH SHRLLFIGNY EYGPNVDAIE
WALDEIMPQV WAQAPHVRFA IGGFGMPQTW RERWPDPRIE WLGFVPDLRA LQATASMFFA
PLRQGGGSKL KTLEAMAAGL PVVTTAQGVS GLTVRHGEHY LGSEDAAGLA ALIAEYTDKP
LQLEQIGEAG RVYVRARHDW SVSAAQLEVI YTRFSFSKQG LRSCV