| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3290 |
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| Symbol | fadB |
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| ID | 3368817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 3936776 |
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| End bp | 3938941 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637653641 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_236360 |
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| Protein GI | 66046519 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0906182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTACG AAGGTAAAGC CATCACGGTT AAGGCTCTTG AAAGTGGCAT CGTCGAATTG
AATTTCGACC TCAAGGGTGA GTCCGTCAAC AAGTTCAACC GTCTCACCCT CAATGAGTTC
CGCCAGGCAG TCGATGCGGT CAAGGCCGAC GCATCGGTCA AGGGCGTGAT TGTCACCAGT
GGCAAAGATT CATTCATTGT CGGCGCCGAT ATCACCGAAT TCGTCGACAA CTTCAAGTTG
CCGGAAGCTG AGCTGGTCGC CGGCAATCTG GAAGCGAACA GGATTTTCAG TGATTTCGAA
GACCTGAACG TGCCGACTGT CGTGGCAATC AACGGTATCG CGCTGGGCGG CGGTCTGGAA
ATGTGCCTGG CCGCAGACTA TCGAGTCATG GCCAGCAGCG CTCGTATCGG TCTGCCCGAG
GTCAAGCTTG GCCTGTACCC GGGTTTCGGC GGCACAGTCC GTCTGCCACG CATTATCGGT
GCCGACAACG CGATCGAGTG GATTGCCTCG GGCAAGGAAA ACGCCGCGGA AGACGCTTTG
AAGGTCGGTG CCGTCGATGC CGTGGTAGCG CCTGAAAAAT TGCAGGCCGC CGCCCTTGAT
CTGATCCAGC GCGCCATTTC CGGCGAGTTC GATTACAAGG CCAAGCGTCA GCCGAAGCTG
GACAAGCTCA AGCTCAATGC CATCGAACAG ATGATGGCAT TCGAAACCGC CAAGGGCTTC
GTTGCAGGTC AGGCCGGCCC GAACTATCCG GCCCCGGTCG AAGCCATCAA GACCATCCAG
AAAGCCGCCA ACTTCGGTCG TGACAAGGCG CTGGAGATCG AAGCCGCCGG TTTCGTGAAA
ATGGCCAAGA CCCCTGCTGC GCAGAGTCTG ATCGGCCTGT TCCTGAACGA TCAGGAGCTG
AAAAAGAAAG CCAGGGGCTA CGACAAGATT GCCAAGGACG TGAAGCAGGC GGCCGTACTG
GGCGCCGGGA TCATGGGCGG CGGCATTGCC TATCAGTCGG CAGTCAAAGG TACGCCGATC
CTGATGAAGG ATATTCGCGA AGAAGCCATT CAACTGGGTC TGAACGAAGC GTCCAAACTG
CTGGGTGGTC GCCTGGAGAA AGGTCGTCTG ACCGCGGCGA AGATGGCCGA AGCGCTTAAC
GCCATTCGTC CTACGCTGTC CTACGGCGAT TTCGGCAATG TCGATCTGGT CGTCGAAGCT
GTCGTCGAGA ACCCCAAGGT CAAGCAGGCG GTACTGGCCG AAGTCGAAGC CAACGTGGGT
GAAAACACCA TTCTGGCGTC CAACACCTCG ACCATCTCGA TCAGCCTGCT GGCCCAGGCC
CTCAAGCGCC CGGAAAACTT CGTCGGCATG CACTTCTTCA ACCCGGTACA CATGATGCCG
CTGGTGGAAG TGATCCGTGG CGAGAAATCC AGTGAAGAAG CGGTCGCGAC GACCGTTGCC
TACGCCAAGA AAATGGGCAA GAACCCGATC GTGGTCAATG ACTGCCCGGG CTTCCTGGTC
AACCGTGTGC TGTTCCCGTA TTTCGGTGGT TTCGCCAGAC TGGTCAGTGC GGGCGTGGAT
TTCGTGCGCA TCGACAAGGT CATGGAAAAA TTCGGCTGGC CGATGGGCCC TGCCTACCTG
ATGGACGTGG TCGGTATCGA CACCGGCCAC CATGGTCGTG ATGTCATGGC CGAAGGTTTC
CCTGATCGCA TGAAAGATGA TCGCCGCTCT GCGATCGATG CCCTGTACGA CGCCAAGCGC
CTCGGGCAGA AGAACGGCAA GGGTTTCTAC GCCTACGAAA CGGACAAGAA GGGCAAGCCC
AAAAAGGTCA ATGACCCGGC CGTGCTGGAC GTGCTCAAGC CGATTGTCTA CGAGCAGCGC
GAAGTCAGCG ATGAAGACAT CGTCAACTGG ATGATGATCC CGCTGTGCCT GGAAACGGTC
CGCTGCCTGG AAGACGGCAT TGTCGAAACC GCTGCCGAGG CTGACATGGG CCTGATCTAC
GGTATCGGTT TCCCTCCGTT CCGTGGCGGC GCGCTGCGCT ACATCGATTC CATCGGTGTT
GCCGAATTCG TTGCCCTGGC TGACCAATAC GCCGAACTGG GTGCCCTGTA TCAACCGACT
GCGAAGCTGC GTGAGATGGC CGCCAACGGC CAGAGCTTCT TCGGTCAAGC GTCTTCCGAG
GAATGA
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| Protein sequence | MIYEGKAITV KALESGIVEL NFDLKGESVN KFNRLTLNEF RQAVDAVKAD ASVKGVIVTS
GKDSFIVGAD ITEFVDNFKL PEAELVAGNL EANRIFSDFE DLNVPTVVAI NGIALGGGLE
MCLAADYRVM ASSARIGLPE VKLGLYPGFG GTVRLPRIIG ADNAIEWIAS GKENAAEDAL
KVGAVDAVVA PEKLQAAALD LIQRAISGEF DYKAKRQPKL DKLKLNAIEQ MMAFETAKGF
VAGQAGPNYP APVEAIKTIQ KAANFGRDKA LEIEAAGFVK MAKTPAAQSL IGLFLNDQEL
KKKARGYDKI AKDVKQAAVL GAGIMGGGIA YQSAVKGTPI LMKDIREEAI QLGLNEASKL
LGGRLEKGRL TAAKMAEALN AIRPTLSYGD FGNVDLVVEA VVENPKVKQA VLAEVEANVG
ENTILASNTS TISISLLAQA LKRPENFVGM HFFNPVHMMP LVEVIRGEKS SEEAVATTVA
YAKKMGKNPI VVNDCPGFLV NRVLFPYFGG FARLVSAGVD FVRIDKVMEK FGWPMGPAYL
MDVVGIDTGH HGRDVMAEGF PDRMKDDRRS AIDALYDAKR LGQKNGKGFY AYETDKKGKP
KKVNDPAVLD VLKPIVYEQR EVSDEDIVNW MMIPLCLETV RCLEDGIVET AAEADMGLIY
GIGFPPFRGG ALRYIDSIGV AEFVALADQY AELGALYQPT AKLREMAANG QSFFGQASSE
E
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