Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3282 |
Symbol | |
ID | 3368809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3929512 |
End bp | 3930228 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653633 |
Product | regulatory protein, TetR |
Protein accession | YP_236352 |
Protein GI | 66046511 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCAGT CGGAAACCGT TGAACGCATT CTTGATGCTG CAGAGCAGTT GTTCGCAGAG AAAGGCTTTG CCGAAACGTC CTTGCGTCTT ATCACCAGCA AGGCGTCGGT CAATCTGGCT GCGGTGAATT ATCACTTCGG CTCGAAGAAG GCGTTGATTC AGGCCGTGTT CTCGCGTTTT CTGGGACCGT TCTGCATCAG TCTCGATCGC GAACTGGAAC GCCGCCAGGC GAAACCCGAA CACAAGCCAA GCCTTGAGGA ACTGCTGGAG ATTCTCGTCG AGCAGGCGCT TGTGGTGCAG CCGCGCAGCG GTAACGACCT GTCGATCTTC ATGCGCCTGC TGGGGCTTGC CTTCAGTCAG AGCCAGGGCC ACCTGCGGCG CTACCTCGAA GACATGTATG GCAAGGTGTT CCGTCGCTAC ATGACGCTGG TCAACGAAGC CGCGCCGCGC ATTCCGCCCA TCGAGCTGTT CTGGCGCGTG CACTTCATGC TCGGCGCTGC GGCGTTCAGC ATGTCCGGGA TCAAGGCCCT GCGCGCCATT GCCGAGACCG ATTTCGGCGT CAATACCTCC ATCGAGCAGG TCATGCGCCT GATGGTGCCT TTTCTGGCCG CCGGCATGCG CGCCGACACC GGCGTCAGCG ATCCTGCGAT GATCGCCGCC CAGCTCAGGC CGCGGACCAA GAGCAGCACC AGCACACCTG CGGTCGCCAA GGCCTGA
|
Protein sequence | MAQSETVERI LDAAEQLFAE KGFAETSLRL ITSKASVNLA AVNYHFGSKK ALIQAVFSRF LGPFCISLDR ELERRQAKPE HKPSLEELLE ILVEQALVVQ PRSGNDLSIF MRLLGLAFSQ SQGHLRRYLE DMYGKVFRRY MTLVNEAAPR IPPIELFWRV HFMLGAAAFS MSGIKALRAI AETDFGVNTS IEQVMRLMVP FLAAGMRADT GVSDPAMIAA QLRPRTKSST STPAVAKA
|
| |