Gene Psyr_3251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3251 
Symbol 
ID3368778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3894678 
End bp3895613 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content60% 
IMG OID637653602 
Producthypothetical protein 
Protein accessionYP_236321 
Protein GI66046480 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0184302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCTA TCAGCCGCAT ACCCCGCATC AGCAAGGCAG AAGCCGTACT GATTCTGATC 
ACCATGCTCT GGGGAGGCAC CTTTCTGCTG GTCCAGCATG CGATGACCGT CAGCGGGCCG
ATGTTCTTCG TCGGCCTGCG CTTTGCCGCC GCAGCGCTTA TCGTAGCGCT GTTTTCAATG
CAGGTGCTGC GCGGTCTTAC CTTTCTCGAA CTCAAGGCCG GTGTCTTCAT CGGCACCGCG
ATCATGCTCG GCTACGGTCT GCAGACCATC GGACTGCAGA CCATCCCCAG TAGCCAGTCG
GCATTCATCA CGGCACTCTA CGTGCCCTGC GTGCCGTTGT TGCAATGGCT GGTATTGGGC
CGGCGACCAG GATTGATGCC GACACTGGGC ATCATCCTCG CTTTCACCGG GCTGATGCTG
GTAGCCGGGC CGCAGGGAGC GTCCCTGCAA CTCAGTTCCG GCGAGATCGT GACGCTGATC
AGCACGGTGG CCATCGCCGC CGAGATCATC ATGATCAGTG CCTATGCCGG TGAGGTCGAT
GTGCGTCGAG TCACCGTGGT GCAACTGGCC ACCGCATCAG CGCTGGCATT TCTGATGATC
GTGCCCACCC AGGAACACTT GCCGGAGTTT TCCTGGTTGC TGGTGCTCAG CGCTGTGGGG
CTTGGGACCA TGAGTGCGGC GATCCAGATC GCCATGAACT GGGCACAGAA AAGTGTTTCG
CCGACCCGCG CCACTGTGAT TTATGCCGGT GAACCGGTCT GGGCCGGCAT TGTCGGAAGA
CTCGCCGGCG AGCGTTTGCC GGGCATTGCC CTGCTGGGTG CGGCACTGAT TGTGGCCGGG
GTGATCGTCA GCGAAATCAA GCGGCGTTCT GCGCCTGATG AACACAACAT TGTCGACGAA
GAGGAAGGAC AACAAGGCGC GCGCAAAGCT GAATGA
 
Protein sequence
MKSISRIPRI SKAEAVLILI TMLWGGTFLL VQHAMTVSGP MFFVGLRFAA AALIVALFSM 
QVLRGLTFLE LKAGVFIGTA IMLGYGLQTI GLQTIPSSQS AFITALYVPC VPLLQWLVLG
RRPGLMPTLG IILAFTGLML VAGPQGASLQ LSSGEIVTLI STVAIAAEII MISAYAGEVD
VRRVTVVQLA TASALAFLMI VPTQEHLPEF SWLLVLSAVG LGTMSAAIQI AMNWAQKSVS
PTRATVIYAG EPVWAGIVGR LAGERLPGIA LLGAALIVAG VIVSEIKRRS APDEHNIVDE
EEGQQGARKA E