Gene Psyr_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3249 
Symbol 
ID3368776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3892551 
End bp3893954 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content66% 
IMG OID637653600 
Producthypothetical protein 
Protein accessionYP_236319 
Protein GI66046478 
COG category[S] Function unknown 
COG ID[COG4529] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAG ATTCCCACCA GACGGCTGAC ATTCTGATCA TCGGCGGCGG TCTGAGCGGG 
ACCATGCTGG CGGCGCAACT GCTGCGCAGA CCGGGCCGGC GCCGAATCCT GATCATCGAA
ACCCGCAGCG AACTCGGCAG GGGCGAGGCC TACAGTGCGA CGGAGCCGGG CCATACACTC
AATGGCAACG CTGCACGGAT GAGCGTCGAT CCGGACAACC CGGATGACCT CACCCAGTGG
CTGACTGACT ATCTGGCTGC CGGTGGCTGG CCTGAAGCCG CCGAGCAGAG GGTCCCGGTC
GCCGAGCTGT TCCCGCCGCG CGGCGTGTTC GGGCTTTATG TCCAGCAGCG ACTGCGTGAA
GCCCGAAGCG CTGGTGAAGC CTTTGGCTCG ACCGCCGTGC ATGTGCCCGG CGAGGCAGTG
GACCTGCAGG TCGATGCGGA TGGCGTGAGT GTCTCGCTGG CTGACGGTCG TAAGGTGCAT
GGCAGCCGGG CTGTGCTGGC GACCGGCATG TACGCGGCTT CACGCACCCC GCGACGTGAT
TCGAACGAGC TGAACACGGC AGCACTGGAC CCCTGGGATG TGGCGGTGAT GAGAAAGCTC
GATCCGCAGT CGAGGGTGCT GATCATCGGC TCGGGGCTGA CCATGGTCGA TGCGCTGGTT
TCGCTGGAAA CGGCCGGGCA TCGTGGGCCC ATCCAGATCT TTTCCCGGCA CGGCCTGCTG
CCGCATGTCC GGCGTCAGCC GCCGGAATGG TCTGATTTTC TTGCTCAGGA CCCGAGTATC
CGCAGTACTC GGCAACTGGT GCGCAAAGTG CGTGAACAGT GCGAGCTGGC CATCGAGAGC
GGCATTGACT GGCAGGCCCC GCTGGACACT GTGCGCGCCA ACGTCGGCAG GCTGTGGAAT
CAGGCCAGCG ATCAACAGCG CCGCCAGTTC GTCCGTCATG TAAGGCCTTG GTGGGAGAGC
CACCACCATC GCTCCCCGCC ACCGAGCGCT GCGCTGCTGG CGCGGCTGAT CAGGCAAGGG
CGGTTGAGTA TTGACGCGGC CTCGCTGCAG GGCGTGGCCA GTCTGCCGTC AGGTCAGGTA
CAGATCAGCG TGCGTCGGCG CGGTGAGAGT CAGCCGACGC AGATCAGCGG CGATGCGCTG
ATCAACTCCA CCGGCATCGA GTACGACTGG CGACGCGTGG ATCGCCCGTT GCCCCGGCAG
TTGCTGGCAC GCGGGCTGAT CCAGCCCGGC CCGCTGGCAC TCGGCATCGC TGCCGACGCT
GCGGGCGCAG TACTTGACGC ACACGGTCAG TACTCGGCAC GCCTGTTCGC CATGGGCCCG
CCATTGCGCG GCATGTGGTG GGAAAGCACC GCAGTAACCG ACGTGGCGAT CCAGGCCAAG
GCGCTGGCGA TACATTTGTC GTAA
 
Protein sequence
MIEDSHQTAD ILIIGGGLSG TMLAAQLLRR PGRRRILIIE TRSELGRGEA YSATEPGHTL 
NGNAARMSVD PDNPDDLTQW LTDYLAAGGW PEAAEQRVPV AELFPPRGVF GLYVQQRLRE
ARSAGEAFGS TAVHVPGEAV DLQVDADGVS VSLADGRKVH GSRAVLATGM YAASRTPRRD
SNELNTAALD PWDVAVMRKL DPQSRVLIIG SGLTMVDALV SLETAGHRGP IQIFSRHGLL
PHVRRQPPEW SDFLAQDPSI RSTRQLVRKV REQCELAIES GIDWQAPLDT VRANVGRLWN
QASDQQRRQF VRHVRPWWES HHHRSPPPSA ALLARLIRQG RLSIDAASLQ GVASLPSGQV
QISVRRRGES QPTQISGDAL INSTGIEYDW RRVDRPLPRQ LLARGLIQPG PLALGIAADA
AGAVLDAHGQ YSARLFAMGP PLRGMWWEST AVTDVAIQAK ALAIHLS