Gene Psyr_3229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3229 
Symbol 
ID3368756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3867642 
End bp3868757 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content62% 
IMG OID637653580 
Productglycosyl transferase, group 1 
Protein accessionYP_236299 
Protein GI66046458 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.453901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.382919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTCA TCAATGCACG GTTTCTTACC CAGGACATCA GTGGTGTACA GCGCTACGCA 
GAGCAGATGT GCCGAGCGCT GAAGCGACTG CGCGACGATC TGGTATTCGT TGCCCCGCAT
AACATCAGAC TGCATGACTG CGCCAGCGCA CTGGAGGCGC ACTGCATCGG GCGCTCCATC
GGGCATGCGT GGGAGCAGAT CGACCTGCCG CTGTACCTGA AACGTCGGGG CAGTCCGCTG
CTGATCTCGA TCAGCAACAC CGGGCCCATG CTGTATGGCA ACCAGATTGC GACTCACCAC
GACATCAACT ATGTGCGCTA CCCGCAAAGT TACACCCGGC TGTTCCGGCT GGCCTATCGG
ACCATCACCC CGATCCTGCT GTCGCGCGCC AGAACGCTGA TCACCGGCAG CCACTTCTCG
CGCAAAGAAA TATCCTCGTT CTATGGCTAC GCAGAAGACA AGGTGCTCGT CGTCCCTGCT
GCGGTCAGCG ACGATTTCAT ACCGGGGCCG ACCGCTGTGA ATCGTCCGAA ATACCTGTTG
GCCGTGTCTT CGCCGGCCGT GCACAAGAAT TTCAGACGGA TGATTCAGGC CTTTCTCAGC
CTGCGTGGCC ACACGGATCT GCAGCTGCAC ATTGTCGGCG CAGCCAGCGC GCTGTTCGCC
GACCCGAACC TGCAACACCT CGCCTGCCGT GACCCGCGTA TCCGTTTTCT GGGACGCCTC
AGTGACGCCG AGCTGATCGC GCAATACCAG GGCGCGACCG CGTTCGTGTT CCCGTCGCTT
TACGAGGGCT TCGGCATCCC GCCGCTCGAA GCCCAGGCCT GCGGCTGTCC GGTGCTGGCG
GCCAATGCCG CGTCGATCCC GGAAGTTCTG CAGGCCAGTG CGCTGTATTT CGACCCGCTG
GACGTCAGTC ACATGGCCGC AGCCATGCAG CGCATTCTGC TGGATGCGCC CTTGCGCAAC
GCGCTGCGTG TCCAGGGCCT GCAAAACGTG CAGCGTTTTT CCTGGGAGCT TTCCGCGCAA
CGCCTTTCCC AGCGCATCGA TACGTTGCTG GCGTCTGACC CCGTGCAGCA AAGCAAGCTG
CACGTCGCTG CCGACTCGCC CAGCGGCAAA CCCTGA
 
Protein sequence
MIFINARFLT QDISGVQRYA EQMCRALKRL RDDLVFVAPH NIRLHDCASA LEAHCIGRSI 
GHAWEQIDLP LYLKRRGSPL LISISNTGPM LYGNQIATHH DINYVRYPQS YTRLFRLAYR
TITPILLSRA RTLITGSHFS RKEISSFYGY AEDKVLVVPA AVSDDFIPGP TAVNRPKYLL
AVSSPAVHKN FRRMIQAFLS LRGHTDLQLH IVGAASALFA DPNLQHLACR DPRIRFLGRL
SDAELIAQYQ GATAFVFPSL YEGFGIPPLE AQACGCPVLA ANAASIPEVL QASALYFDPL
DVSHMAAAMQ RILLDAPLRN ALRVQGLQNV QRFSWELSAQ RLSQRIDTLL ASDPVQQSKL
HVAADSPSGK P