Gene Psyr_3228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3228 
Symbol 
ID3368755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3866332 
End bp3867537 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content62% 
IMG OID637653579 
Productglycosyl transferase, group 1 
Protein accessionYP_236298 
Protein GI66046457 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.948731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.566821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCC TTTTCATCAA CAGCCTCTAC GCACCCGATA TCGGCGGCGG CGCAGAAATC 
ATTCTGCAAC GTACCGTCGA GGGCTTGCAG CAGCGTGGGC ACAGCGTCGC GGTACTGGCC
ACCACCGACC AGCCTGGCTT GCAGCTGGCG GAGGTCAATC GGGTGAAGGT CTATCGGGCC
GGCCTGCTCA ACCGCTACTG GCACTTCATG GCCCAGCGCC CAGGACGACT GGCGCGGTTT
GCCTGGCACT GGCGTGATCG CTACAACGCG GATATGCGCG AGTACGTGGA GCGCGTGATG
GAACTGGAGC AGCCGGAACT GGTGGTGTGC CATAACCTGA CAGGCTGGTC GGTCTCGGCA
TGGGACCAGA TCACCCAGGC CGATTGCCCG ATCGTGCAGG TGCTGCATGA CTTCTACCTG
CTCTGCCCGG CAAGCACGAT GTTCAGAAAA GGCAAAAGCT GTCAGCGCCA GTGCACGACG
TGCACACGGT TGCGCAGCCA TCATGCACAA CAGTCGGAAC AGGTCAGCGC GGTGGTCGGT
GTCAGCCGCT TCATGCTCGA CACGCTGCAG GCGCAGGGTT ATTTCAAGGG CGCGAGAGGG
TATGTGGTGC ATAACGCCAG CCCGTTTACG CCAGCGCCTC GCGAGCAACC CGGAGCGCCT
GTCGATACCG CGCCGTTGCG CTTCGGTTAC CTGGGCACAC TGTCGACCAA CAAGGGGCTG
GAGTGGCTGA TCGAGCAGTT CCAGCGCCTA CCGTTCAAAG CCACCCTGCA GATTGCCGGG
CGCGGACAGC CATCTGACGA AAAGCGCTTC AGGGCCATGG TCACGTCCCC CGACATCAGC
TTCGTCGGCT TGCAGAAACC CGATAATTTT TACCGCCAGA TCGACGTGGC GATCGTGCCC
TCGATGTGGA ATGAGCCATT CGGCATGGTC GCGGTCGAGG CGTGCGCGCA CTCGCTGCCG
GTCATCGCCA GCCGCATGGG CGGGCTCACG GAAATCATTC AGGAACCGCT CAACGGCTTG
CTGTGCAGCC CCGATGACCC CGATTCACTG GGGCTGGCGA TGCTCAGGCT GCATCAGCAG
CCCGAACTGC TGGCACGCCT CGGCAGCCAG GCACGCAGCA GCGTCGCGTC GTTGATGAAT
CTGGACCTGA TGCTGGACCA GTACGAAAGC ATCTTCGCCC AGACCTTGCA GGACCGCAGC
ACGTAG
 
Protein sequence
MKILFINSLY APDIGGGAEI ILQRTVEGLQ QRGHSVAVLA TTDQPGLQLA EVNRVKVYRA 
GLLNRYWHFM AQRPGRLARF AWHWRDRYNA DMREYVERVM ELEQPELVVC HNLTGWSVSA
WDQITQADCP IVQVLHDFYL LCPASTMFRK GKSCQRQCTT CTRLRSHHAQ QSEQVSAVVG
VSRFMLDTLQ AQGYFKGARG YVVHNASPFT PAPREQPGAP VDTAPLRFGY LGTLSTNKGL
EWLIEQFQRL PFKATLQIAG RGQPSDEKRF RAMVTSPDIS FVGLQKPDNF YRQIDVAIVP
SMWNEPFGMV AVEACAHSLP VIASRMGGLT EIIQEPLNGL LCSPDDPDSL GLAMLRLHQQ
PELLARLGSQ ARSSVASLMN LDLMLDQYES IFAQTLQDRS T