Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3228 |
Symbol | |
ID | 3368755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3866332 |
End bp | 3867537 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637653579 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_236298 |
Protein GI | 66046457 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.948731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.566821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCC TTTTCATCAA CAGCCTCTAC GCACCCGATA TCGGCGGCGG CGCAGAAATC ATTCTGCAAC GTACCGTCGA GGGCTTGCAG CAGCGTGGGC ACAGCGTCGC GGTACTGGCC ACCACCGACC AGCCTGGCTT GCAGCTGGCG GAGGTCAATC GGGTGAAGGT CTATCGGGCC GGCCTGCTCA ACCGCTACTG GCACTTCATG GCCCAGCGCC CAGGACGACT GGCGCGGTTT GCCTGGCACT GGCGTGATCG CTACAACGCG GATATGCGCG AGTACGTGGA GCGCGTGATG GAACTGGAGC AGCCGGAACT GGTGGTGTGC CATAACCTGA CAGGCTGGTC GGTCTCGGCA TGGGACCAGA TCACCCAGGC CGATTGCCCG ATCGTGCAGG TGCTGCATGA CTTCTACCTG CTCTGCCCGG CAAGCACGAT GTTCAGAAAA GGCAAAAGCT GTCAGCGCCA GTGCACGACG TGCACACGGT TGCGCAGCCA TCATGCACAA CAGTCGGAAC AGGTCAGCGC GGTGGTCGGT GTCAGCCGCT TCATGCTCGA CACGCTGCAG GCGCAGGGTT ATTTCAAGGG CGCGAGAGGG TATGTGGTGC ATAACGCCAG CCCGTTTACG CCAGCGCCTC GCGAGCAACC CGGAGCGCCT GTCGATACCG CGCCGTTGCG CTTCGGTTAC CTGGGCACAC TGTCGACCAA CAAGGGGCTG GAGTGGCTGA TCGAGCAGTT CCAGCGCCTA CCGTTCAAAG CCACCCTGCA GATTGCCGGG CGCGGACAGC CATCTGACGA AAAGCGCTTC AGGGCCATGG TCACGTCCCC CGACATCAGC TTCGTCGGCT TGCAGAAACC CGATAATTTT TACCGCCAGA TCGACGTGGC GATCGTGCCC TCGATGTGGA ATGAGCCATT CGGCATGGTC GCGGTCGAGG CGTGCGCGCA CTCGCTGCCG GTCATCGCCA GCCGCATGGG CGGGCTCACG GAAATCATTC AGGAACCGCT CAACGGCTTG CTGTGCAGCC CCGATGACCC CGATTCACTG GGGCTGGCGA TGCTCAGGCT GCATCAGCAG CCCGAACTGC TGGCACGCCT CGGCAGCCAG GCACGCAGCA GCGTCGCGTC GTTGATGAAT CTGGACCTGA TGCTGGACCA GTACGAAAGC ATCTTCGCCC AGACCTTGCA GGACCGCAGC ACGTAG
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Protein sequence | MKILFINSLY APDIGGGAEI ILQRTVEGLQ QRGHSVAVLA TTDQPGLQLA EVNRVKVYRA GLLNRYWHFM AQRPGRLARF AWHWRDRYNA DMREYVERVM ELEQPELVVC HNLTGWSVSA WDQITQADCP IVQVLHDFYL LCPASTMFRK GKSCQRQCTT CTRLRSHHAQ QSEQVSAVVG VSRFMLDTLQ AQGYFKGARG YVVHNASPFT PAPREQPGAP VDTAPLRFGY LGTLSTNKGL EWLIEQFQRL PFKATLQIAG RGQPSDEKRF RAMVTSPDIS FVGLQKPDNF YRQIDVAIVP SMWNEPFGMV AVEACAHSLP VIASRMGGLT EIIQEPLNGL LCSPDDPDSL GLAMLRLHQQ PELLARLGSQ ARSSVASLMN LDLMLDQYES IFAQTLQDRS T
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