Gene Psyr_3210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3210 
Symbol 
ID3368732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3842764 
End bp3843828 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content58% 
IMG OID637653556 
Producthypothetical protein 
Protein accessionYP_236280 
Protein GI66046439 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.212604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA CCACGCTGCA ATACAAAACC CTCATTCTGC TACTGGTACT GGTGACCATT 
GCCTTCATAT GGATTCTGCT GCCGTTCTAT GGCGCAGTAT TCTGGGCGGT CATCCTTGGA
ATCATCTTCG CGCCTGTGCA GCGCAAGTTG CAGATCAAGT TCAACTGGTC ACGCAATCTC
ACTTCCCTGT GCACCCTGAC GATCTGTCTG GTCATCGCGA TTCTGCCGGT GATCGTGATC
AGCGCCTTGC TGGTTCAGGA GGGCACCACG CTGTACAAGA ACGTCGAGAC CGGGCAACTG
GATATCGCCG GTTATCTGGC CGAGTTCAAG GACCTGTTGC CGCACTCCAT GCAGGCGCTG
CTCGATCGTC TGGGCATGGG CGACCTGGAG GGGTTACGCG ACAAGATTGC CAAGGGCGCG
ATGCAGGGCA GTCAGTACCT GGCGACGCAG GCATTCAGCT TCGGGCAGGG CACCTTCGAC
TTTGTCGTCA GCGTCTTCAT CATGCTTTAC CTGCTGTACT TCTTCCTGCG CGACGGACAG
GAGCTGGTAC GCAAGATCCG CACGGCCTTC CCGTTGGGCG AACAGCAGAA GCGTCGTCTG
CAGCTCAAGT TCACCCGAGT GGTACGTGCC ACTGTCAAAG GCAACGTGGT GGTCGCGGTG
ACGCAAGGTG CGCTGGGTGG CTTCATCTTT TGGATGCTGG ACATCCCGAG TGCGTTGCTC
TGGGCGGTGA TCATGGCGTT CCTGTCGCTG TTGCCTGCGG TGGGAGCCGG GATTGTCTGG
GCGCCAGTGG CGATCTACTT CCTGCTTAGC GGCATGATCT GGCAAGGTGT GGTACTGGGC
TTGTTTGGCG TCCTGGTGAT CGGTCTGGTG GATAACGTCC TGCGTCCGAT CCTGGTGGGC
AAGGACACCA AAATGCCGGA CTACCTGATC CTTATTTCCA CGCTGGGCGG CATGTCGGTC
TTTGGTCTGA ACGGCTTTGT GATCGGGCCT CTGGTGGCGG CGCTGTTCAT GTCCAGCTGG
GGATTGTTCA GCGGCGCCAA GAAGCCCGTG AAACTGCCTG GCTGA
 
Protein sequence
MNETTLQYKT LILLLVLVTI AFIWILLPFY GAVFWAVILG IIFAPVQRKL QIKFNWSRNL 
TSLCTLTICL VIAILPVIVI SALLVQEGTT LYKNVETGQL DIAGYLAEFK DLLPHSMQAL
LDRLGMGDLE GLRDKIAKGA MQGSQYLATQ AFSFGQGTFD FVVSVFIMLY LLYFFLRDGQ
ELVRKIRTAF PLGEQQKRRL QLKFTRVVRA TVKGNVVVAV TQGALGGFIF WMLDIPSALL
WAVIMAFLSL LPAVGAGIVW APVAIYFLLS GMIWQGVVLG LFGVLVIGLV DNVLRPILVG
KDTKMPDYLI LISTLGGMSV FGLNGFVIGP LVAALFMSSW GLFSGAKKPV KLPG