| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3190 |
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| Symbol | mnmA |
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| ID | 3368712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3819564 |
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| End bp | 3820694 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637653536 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_236260 |
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| Protein GI | 66046419 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.127789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.150501 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGATC CAGCCCCCTC GAACTCAGAA ATGAAGCGCG TCATAGTCGG CATGTCCGGC
GGCGTGGACT CTTCCGTTTC CGCCGTACTG CTCATGGAGC AGGGTTATCA GGTGGAAGGC
TTGTTCATGA AGAACTGGGA AGAAGACGAC GGAACGGAAT ACTGCACCGC CCGCGAAGAC
CTGGCAGATG CCCAGGCCGT GTGCGACAAG ATCGGCATCA AGCTGCACAC GGCCAACTTC
GCGGCCGAGT ACTGGGACAA CGTCTTCGAG CACTTCCTTG AAGAGTACAA GGCCGGGCGC
ACGCCGAACC CGGACATCCT GTGTAACCGC GAAATCAAGT TCAAGGCGTT TCTCGACTAC
GCACTGATGC TCGGCGCCGA CCTTATTGCT ACCGGTCATT ACGTACGTCG CCGCGATATC
GATGGACGTA CCGAGCTGCT CAAGGGCCTG GACCCGAACA AGGACCAGAG CTACTTCCTG
CACGCCGTTG GCGGCGAGCA GATTGCCCGC ACGTTGTTCC CGGTTGGCGA GCTGGAAAAA
CCGGAAGTGC GTGCCATTGC CGAAAAGCAC GGCCTGGCCA CTGCCAAGAA GAAGGATTCC
ACCGGCATCT GCTTCATTGG CGAGCGCCGC TTCACCGACT TTCTGCGTCA GTACCTGCCC
GCCCAGCCCG GTGAGATCAA GACCACCGAA GGCGAAGTCA TCGGTCGTCA CAGCGGCCTG
ATGTACCACA CCATCGGCCA GCGTCAGGGC CTGGGCATTG GCGGTCTCAA GGACGCCAGC
GACGATCCGT GGTACGTGCT GGTCAAGGAC CTGGAAAACA ATGAACTGAT CGTCGGCCAG
GGCAACGATC ATCCCTGGCT GTTTTCCCGT GCGCTGGTCT CTTCGGAAAT CTATTGGGTC
AATCCGATCG ATCTGAGCAG CCCGCGCAGG CTCACCGCGA AGGTCCGTTA CCGTCAGGGC
GACCAGCCAT GCACGCTGGA AAAGACCGCT GACGGGTACC GCGCCACATT CGATGACCCA
CAGCGCGCCG TCACCCCCGG CCAGTCCGTG GTGTTCTACG ACGGCGAAAT CTGTCTGGGC
GGCGGCGTGA TCGAAATTGC CGAACCCTGG ACCACCAAGG ACAAGCGTTG A
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| Protein sequence | MRDPAPSNSE MKRVIVGMSG GVDSSVSAVL LMEQGYQVEG LFMKNWEEDD GTEYCTARED
LADAQAVCDK IGIKLHTANF AAEYWDNVFE HFLEEYKAGR TPNPDILCNR EIKFKAFLDY
ALMLGADLIA TGHYVRRRDI DGRTELLKGL DPNKDQSYFL HAVGGEQIAR TLFPVGELEK
PEVRAIAEKH GLATAKKKDS TGICFIGERR FTDFLRQYLP AQPGEIKTTE GEVIGRHSGL
MYHTIGQRQG LGIGGLKDAS DDPWYVLVKD LENNELIVGQ GNDHPWLFSR ALVSSEIYWV
NPIDLSSPRR LTAKVRYRQG DQPCTLEKTA DGYRATFDDP QRAVTPGQSV VFYDGEICLG
GGVIEIAEPW TTKDKR
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