Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3175 |
Symbol | |
ID | 3368697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3802292 |
End bp | 3803572 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653521 |
Product | seryl-tRNA synthetase |
Protein accession | YP_236245 |
Protein GI | 66046404 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.499903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.106811 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATT CCAAACTGTT ACGTACTCAA CTTCAGGACG TAGCGGATCG CCTGGCTTCC CGTGGCTTCA CTCTGGATGT GGCGCGCATT GAATCGCTGG AAGCCCAGCG CAAGGTAGTG CAGACCCGCA CCGAACAGCT GCAGGCCGAG CGCAATGCCC GTTCCAAATC CATTGGTCAG GCCAAGCAGC GCGGTGAGGA TATTGCGCCG TTGATGGCTG ATGTCGAGCG CATGGGCAAC GAGCTGAGCG AAGGCAAGGT CGAGCTGGAC GGCATTCAGG CCGAACTGGA TGCGCTGGTG CTGAGCATTC CGAACCTGCC TCATGAGTCC GTGCCGGTCG GTGCCGACGA AGAAGGCAAC GTCGAAGTAC GTCGCTGGGG TACGCCGACG TCATTCGATT TCGAGGTCAA GGATCACGTT GCGCTGGGCG AGAAGTTCGG CTGGCTGGAT TTCGAGACTG CCGCCAAGCT GTCCGGCGCG CGCTTTGCGC TGCTGCGTGG CCCGATCGCA CGTCTGCACC GTGCCCTCGC ACAATTCATG ATCAATCTGC ACATCAACGA GCACGGCTAC GAAGAGACCT ACACGCCCTA TCTGGTGCAG GCTCCAGCGT TGCAGGGCAC AGGTCAGCTG CCCAAGTTCG AGGAAGACCT GTTCAAGATC TCCCGCGAAG GTGAAGCCGA CCTGTACCTG ATTCCGACTG CCGAAGTGTC GCTGACCAAT ATCGTGTCGG GTGAAATCCT CGACGCCAAA CAGCTGCCTC TCAAGTTTGT CGCCCATACC CCTTGCTTCC GCAGTGAAGC GGGCGCGTCC GGGCGTGATA CCCGCGGCAT GATCCGCCAG CACCAGTTCG ACAAGGTCGA GATGGTCCAG ATCGTTGCGC CTGACGACTC CATGGCCGCG CTCGAGTCGC TGACCGGCAA CGCCGAACGC GTGCTGCAAC TGCTTGAACT GCCTTATCGC ACGCTGGCGC TGTGCACCGG CGACATGGGT TTCAGCGCGG TGAAGACCTA CGACCTGGAA GTCTGGATTC CGAGCCAGGA CAAATATCGC GAAATCTCTT CCTGCTCCAA CTGCGGTGAT TTCCAGGCGC GCCGCATGCA GGCTCGCTGG CGCAACCCGG AAACCGGCAA GCCGGAGCTG GTCCACACCC TCAACGGGTC GGGCCTGGCG GTAGGCCGCA CACTGGTGGC GGTGCTGGAA AACTATCAGC AGGCGGACGG TTCGATTCGT GTGCCTGAGG TGCTCAAGCC TTACATGGGC GGCCTTGAGG TCATCGGTTA A
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Protein sequence | MLDSKLLRTQ LQDVADRLAS RGFTLDVARI ESLEAQRKVV QTRTEQLQAE RNARSKSIGQ AKQRGEDIAP LMADVERMGN ELSEGKVELD GIQAELDALV LSIPNLPHES VPVGADEEGN VEVRRWGTPT SFDFEVKDHV ALGEKFGWLD FETAAKLSGA RFALLRGPIA RLHRALAQFM INLHINEHGY EETYTPYLVQ APALQGTGQL PKFEEDLFKI SREGEADLYL IPTAEVSLTN IVSGEILDAK QLPLKFVAHT PCFRSEAGAS GRDTRGMIRQ HQFDKVEMVQ IVAPDDSMAA LESLTGNAER VLQLLELPYR TLALCTGDMG FSAVKTYDLE VWIPSQDKYR EISSCSNCGD FQARRMQARW RNPETGKPEL VHTLNGSGLA VGRTLVAVLE NYQQADGSIR VPEVLKPYMG GLEVIG
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