Gene Psyr_3165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3165 
Symbol 
ID3368687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3794140 
End bp3795048 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content61% 
IMG OID637653511 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_236235 
Protein GI66046394 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.314195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCA ATTTCGACCT CAACGACCTC CAGGCATTTC GTGCCGTAGT GGAGAACGGC 
AGCTTCCGCA AGGCCGCTGA AACCGTGCAG ATCACCCAGC CTGCGCTCAG TCGGCGGATA
GAAAAGCTCG AGTCTGCACT GAACGTGAAG CTGTTCGAGC GCACCACCCG CAGGGTCAGT
CTGACTACGG TCGGCCGCGC ATTTCTGCCT CAGGTCGAGC GCATTCTGGA CGATCTGGAC
AGCGCATTGA TGACCATCGA AGGCGTCGGC TCCACGCGAA TGGGCAGCGT GACGATTGCC
TGCGTGCCTT CAGCCGCCTA TTACTTCATG CCGCAGGTCA TCAGCGCTTT CCATCGGTTG
TTTCCGAAAA TCAGAATCCG GGTGATGGAT GCCAGCGCCA ACGAGGTCAA CAGCGCAGTT
GCCCTGGGCG AAGCCGATTT CGGGGTGAGT TTCAGCGGCA ATCTGGCGCC GGAAGTGGAC
TTCGAACTGC TGCTGCAGGA ACGCTACGTA ATGGCCTGCA GGCGGGATCA CCCGCTGGCT
ACGTGCGAAA GCGTCAGTTG GGAAGAGATG TACCGCCATG ACTACATCGC CCTGGACATC
ACCTCGGGTA ATCGTCTGGT GCTGGATCAG GCGCTGGCAC CTTCGCGCCC GCACAAGGAA
AGCATCTGCG AAACCCGCCA TGTCACGACG ATGATCGGCC TGGTCGAAGC GGGCCTTGGC
GTGGCTGCGG TGCCCTCCAT CGCCATGCCG ATGACCGCTC ACCCGTTTCT GGTGAGCGTG
CCATTGGTTG CGCCCGAGGT GATTCGCAAC GTAGGGCTGA TCAAGCGTCG TGGCAGGACC
TTGACACCGG CAGCCCTCGA GCTGGAGCAA CTGGTCAGGA AAATGCCGTC ACGCTCAGCG
GGGAACTGA
 
Protein sequence
MPINFDLNDL QAFRAVVENG SFRKAAETVQ ITQPALSRRI EKLESALNVK LFERTTRRVS 
LTTVGRAFLP QVERILDDLD SALMTIEGVG STRMGSVTIA CVPSAAYYFM PQVISAFHRL
FPKIRIRVMD ASANEVNSAV ALGEADFGVS FSGNLAPEVD FELLLQERYV MACRRDHPLA
TCESVSWEEM YRHDYIALDI TSGNRLVLDQ ALAPSRPHKE SICETRHVTT MIGLVEAGLG
VAAVPSIAMP MTAHPFLVSV PLVAPEVIRN VGLIKRRGRT LTPAALELEQ LVRKMPSRSA
GN