Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3164 |
Symbol | |
ID | 3368685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3793117 |
End bp | 3793788 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637653509 |
Product | hypothetical protein |
Protein accession | YP_236234 |
Protein GI | 66046393 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.30239 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGAAC AGGATTACAG CCTTAAAACC GGCATGCAGG CCGACCAGCT CGAGGTTAGT CGTGTCCTGC GCAATACTTA CGGTCTTCTC GCCCTGACAC TGGCTTTCAG TGGTGTCATG GCCTTCGTCG CTCAGCAGAT GCGCGTCGGC TACCCGAACA TTTTCGTGGT GCTGATCGGC TTCTACGGTC TGTTCTTCCT GACCAACAAG CTGCGTGATT CGGTCTGGGG TCTGGTGTCG ACCTTCGCCC TGACAGGTTT CATGGGGTTC CTGCTGGGCC CGATCCTCAA CCGTTACCTG GGCATGGCCG GGGGGGCTGA AGTGGTCAGC TCCGCCTTCG CGATGACGGC TCTGGTATTC GGCGGTCTTT CGGCCTATGT ACTGATCACT CGCAAGGACA TGAGCTTCCT GGGTGGTTTC ATTACCGCAG GTTTCTTTGT CCTGCTGGGT GCAGTAGTGG CCAGCATGTT CTTCCAGATC AGCGGTCTGC AACTGGCTAT CAGCGCGGGC TTCGTGCTGT TCTCGTCGGT CTGCATTCTG TTCCAGACCA GCGCGATCAT TCAGGGTGGC GAGCGTAACT ACATCATGGC GACGGTCAGC CTGTATGTAT CGATCTATAA CCTGTTCATC AGCCTGCTGC AGATCTTCGG CATCATGAGC CGCGACGACT GA
|
Protein sequence | MREQDYSLKT GMQADQLEVS RVLRNTYGLL ALTLAFSGVM AFVAQQMRVG YPNIFVVLIG FYGLFFLTNK LRDSVWGLVS TFALTGFMGF LLGPILNRYL GMAGGAEVVS SAFAMTALVF GGLSAYVLIT RKDMSFLGGF ITAGFFVLLG AVVASMFFQI SGLQLAISAG FVLFSSVCIL FQTSAIIQGG ERNYIMATVS LYVSIYNLFI SLLQIFGIMS RDD
|
| |