| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3076 |
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| Symbol | |
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| ID | 3368596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 3678036 |
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| End bp | 3680198 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637653422 |
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| Product | Type I secretion system ATPase, HlyB |
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| Protein accession | YP_236148 |
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| Protein GI | 66046307 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATT CGGAAATGGG CACTCAAATG CCTGACAATG CCCCTCGCCT GGACACCGGC
CTTGCCTCGC TGGTCATGCT TGCGCGCTTT CATCAGGTGG CGGCTTCGCC AGAGCAACTT
GCCCATGAGT TTGGCAGCCC TGACCAGTAT CTGTCGCAGG ACAGCCTGTT ACTGGCGGCC
CGTAAACTCG GCTTGAAAGC CAAGGCTGCG AGGACCACCA CCGAGCGTTT GGACCGTACA
CCACTTCCCG CGATAGCAGC GGACAATAAC GGTGGTTTCT TCATCATCGC GCGTCTTGAT
CAAGGCAAGG CGCTTATCCA CGACCCTTTT TCTCAACGCC CCGAGGTTGT TACTTTCGAG
GCCTTGCAGG AGCGTTGGAC AGGCCAGTTA CTGCTCATTC GCTCGGAGGC CGGAACGCCG
GGCGAGTCTT CAAGTTTCGA TTTCACCTGG TTCATTCCTG CCATCGTCAA GTACCGGAAG
TTGCTGGGCG AAGTGATGCT GGTTTCCTTC GTCCTGCAAA TTTTCTCGCT GATCACACCG
CTGTTCTTCC AGGTAGTGAT GGACAAGGTA CTTGTCCATC ACGGATTGAC CACCCTCGAC
GTTATCGCCA TCGGCCTTGC CGGGGTGATG CTGTTCGAGT CGGCCTTGTC TGGCTTGCGC
ACCTACGTGT TCGCACACAC CGCCAGCCGC ATCGACGTAG AGCTGGGTTC GAAGCTGTTT
CGTCACTTGA TCACGTTGCC GCTCTCGTAC TTTCAGGCTC GCCGCGTGGG CGATTCGGTA
GCACGGGTGC GTGAACTGGA AAACATCCGC AACTTCCTGA CCGGCAATGC CATCACCCTG
TTGCTGGATG TGCTGTTCTC GGTGGTGTTC ATTGCGGTGA TGTTTTACTA CAGCGGTTGG
TTGACGTTGA TCGTGCTGTT GTCCCTGCCG CTCTACATTC TGGTGTCGGT GCTCATTACT
CCTGTGTTGC GCAAACGCCT TAACGACAGT TTTGCCCGAG GCGCTGAGAA CCAAGCGTTT
CTGGTCGAAA CGGTTAACGG CATCGACACC CTTAAATCGA TGGCAGTGGA GCCTCAAGCC
ATTCGCAAGT GGGATAACCA GTTGGCGGGC TATGTCGCAG CCGGATTCAA AACTCAGAAC
CTGTCGACCA TTGCCAACGA AAGTGTCTCT CTGATCGGCA AACTGGTGAC TGTTGCAACC
CTGTGGTTTG GCGCGCGTCT GGTGATTGAC GGCCAACTTT CGGTCGGTCA GTTGATTGCA
TTCAACATGC TCGCCGGGCG TGTTGCCCAG CCGATCATGC GCCTTGCGCA ACTGTGGACC
AACTTCCAGC AGACCGGCGT ATCGGTGCAG CGCCTGGGCG ACATCCTCAA TACCCGTAAC
GAACTCTCGC AAGTCAACCG CAGTGCGTTA CCGCCGATCA AGGGGCGCAT CGAGTTTGAT
CAGGTGCATT TCCGCTATCG CCCAGACGGC TCGGAGATCC TGCGGGGCAT CAATCTTGTT
ATCACGCCAG GCCAGGTCAT CGGTGTGGTG GGGCGTTCCG GCTCTGGCAA AAGCACACTG
ACGCGTCTGT TACAGCGCCT TTATGTACCG GAGCGCGGTC GGGTGTTGGT AGACGGCATG
GATCTGGCCC TGGCAGACGT CTCTTCCCTG CGCCGCCAGA TCGGCGTGGT ACTGCAAGAC
AATATGCTGT TCAACCGCAG CATTCGCGAA AACATCGCCT TGAGTGATGC CGGAGCGCCT
TTGGAAGCCG TGATGCAAAT GGCCAAACTG GCTGGCGCCC ACGACTTCAT CCTTGAGCTG
CCGGAGGGCT ACGACACAAT GGTCGGTGAG CACGGTGCGT CGTTATCCGG CGGTCAGCGC
CAACGTATCG CTATCGCCCG CGCCCTGATG GGCAACCCGC GCATCCTGAT TTTCGACGAG
GCCACCAGTG CGCTGGACTA TGAGTCCGAG CGCATTGTTC AGCAGAACAT GCAGGCCATC
TGCAAGGGGC GCACGGTGAT CATCATCGCG CATCGGCTGT CTGCCGTTCG CGATGCCAAC
CGCATCGTTG TAGTCGATCG CGGGCAAATT GTAGAGCAGG GCACTCATGC CGAATTGCTC
ACACATCAAG CAGGTCATTA CTCGCGCCTT CATCGCCTGC AGCAGGGAGG CAGCCATGTC
TAA
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| Protein sequence | MNDSEMGTQM PDNAPRLDTG LASLVMLARF HQVAASPEQL AHEFGSPDQY LSQDSLLLAA
RKLGLKAKAA RTTTERLDRT PLPAIAADNN GGFFIIARLD QGKALIHDPF SQRPEVVTFE
ALQERWTGQL LLIRSEAGTP GESSSFDFTW FIPAIVKYRK LLGEVMLVSF VLQIFSLITP
LFFQVVMDKV LVHHGLTTLD VIAIGLAGVM LFESALSGLR TYVFAHTASR IDVELGSKLF
RHLITLPLSY FQARRVGDSV ARVRELENIR NFLTGNAITL LLDVLFSVVF IAVMFYYSGW
LTLIVLLSLP LYILVSVLIT PVLRKRLNDS FARGAENQAF LVETVNGIDT LKSMAVEPQA
IRKWDNQLAG YVAAGFKTQN LSTIANESVS LIGKLVTVAT LWFGARLVID GQLSVGQLIA
FNMLAGRVAQ PIMRLAQLWT NFQQTGVSVQ RLGDILNTRN ELSQVNRSAL PPIKGRIEFD
QVHFRYRPDG SEILRGINLV ITPGQVIGVV GRSGSGKSTL TRLLQRLYVP ERGRVLVDGM
DLALADVSSL RRQIGVVLQD NMLFNRSIRE NIALSDAGAP LEAVMQMAKL AGAHDFILEL
PEGYDTMVGE HGASLSGGQR QRIAIARALM GNPRILIFDE ATSALDYESE RIVQQNMQAI
CKGRTVIIIA HRLSAVRDAN RIVVVDRGQI VEQGTHAELL THQAGHYSRL HRLQQGGSHV
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