| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3047 |
|---|
| Symbol | |
|---|
| ID | 3368567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 3645369 |
|---|
| End bp | 3645818 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637653393 |
|---|
| Product | helix-hairpin-helix DNA-binding motif-containing protein |
|---|
| Protein accession | YP_236119 |
|---|
| Protein GI | 66046278 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0185896 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGGA TCGGACCACG ACTTAAAAAG GAACGTTTGC GCCTCAAGCT TTCGCAGAGT
GCATTGGGGG CGATAGGTGG CGTGGAAACC AACGCCCAGG GCAACTACGA AAATGGCGTC
CGCTCCCCCC GTGCGGATTA TCTGTCCAGC ATTTCGAATG CCGGAGTGGA TGTTGCCTAT
GTGGTCACCG GCCTCAGCGC TACACGTAAC GTCCCCGCTG TCATAACGTC AGACAGTCAG
AGCAGCGCCC CGCTCAACCG CGTCGTCGAA CGCCTGCACG GCAACCTGCA CGACGTGACC
CAGAATCTGT ACCACTTCAC CCGCCTGATC GAATCGAACT CAGGCATTGG CAATGTGGAC
AGCAATCAGC TGGAAAACAT CAAGAACGAC GCCGAAGCGA TCACCGTCGC CACTGTTCGG
CTGATCTACA TGACGTCACG AATCAAGTAA
|
|---|
| Protein sequence | MTGIGPRLKK ERLRLKLSQS ALGAIGGVET NAQGNYENGV RSPRADYLSS ISNAGVDVAY
VVTGLSATRN VPAVITSDSQ SSAPLNRVVE RLHGNLHDVT QNLYHFTRLI ESNSGIGNVD
SNQLENIKND AEAITVATVR LIYMTSRIK
|
|---|
| |