Gene Psyr_3046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3046 
Symbol 
ID3368566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand+ 
Start bp3644461 
End bp3645084 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content64% 
IMG OID637653392 
Producthypothetical protein 
Protein accessionYP_236118 
Protein GI66046277 
COG category[S] Function unknown 
COG ID[COG3009] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.796041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones7 
Fosmid unclonability p-value0.0181531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGC GCCTGAAACT GATGGTACTT GCCGCAGCAG TGGGCCTGGG TGCCTGCACA 
TCGACGCAGA CCCACTACTA CACGCTGATC GCGCCGATGA GCGCGACGAG CACGGCCGCC 
AGCAAACCCA TGCCTTTCCA GTTCGAGATG CTGCCGGTCA TCATGCCGGT GCAGGTCGAC 
CAGCCGCCGC TGGTGGTTCG TCAGGGTAAC GGCAGCCTGG CCATTCTGGA CACCGAACGC 
TGGGGATCAC CGCTGGGCGA CGAGTTTCAC GATGCGCTGA CCCCGCAACT GGAGCGTCGC 
TTCGGCAGCC GCGACATGGC CGGCTTGCCG AAAAACAGCG ATCAGCCAAC GCTGTCGCTG 
CGTACCGACG TGCGGCGCTT CGAGTCGATG CCTGGCAATT ACGCACTCAT TGACGTGGTG 
TGGACACTCG GGCTTCGCGA AGCTGGTGCC ACGGCGGGCA GCAAACGGCA GAGCCTGACC 
TGCAGCAGCG TGATCCGCGA GCAGGCCGGT GAAGGCATGG AAAATCTCAT CATGGCCCAC 
CAGAAAGCGG TTGCCCAGCT GGCAGACAAG ATCGCCGCTA CGGCCGCGAG CTGGACCGCA 
CAGCGCGCCT CGCGCTGCCT CTGA
 
Protein sequence
MTLRLKLMVL AAAVGLGACT STQTHYYTLI APMSATSTAA SKPMPFQFEM LPVIMPVQVD 
QPPLVVRQGN GSLAILDTER WGSPLGDEFH DALTPQLERR FGSRDMAGLP KNSDQPTLSL 
RTDVRRFESM PGNYALIDVV WTLGLREAGA TAGSKRQSLT CSSVIREQAG EGMENLIMAH 
QKAVAQLADK IAATAASWTA QRASRCL