Gene Psyr_3018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3018 
Symbol 
ID3368538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3614279 
End bp3615001 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content65% 
IMG OID637653364 
Producthypothetical protein 
Protein accessionYP_236090 
Protein GI66046249 
COG category[S] Function unknown 
COG ID[COG5446] Predicted integral membrane protein 
TIGRFAM ID[TIGR02458] cobalt transporter subunit CbtA (proposed) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.960935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.157987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGC GAATCGCCTA CACCGCAGGT TTCACCGGCC TGCTCGCCGC CCTGCTGCTG 
ACCCTGCTGC AAAGCCTGTG GGTGGTGCCG CTGATCCAGC AGGCCGAGAC CTACGAAAAC
GCGCCTGCCG AGCAACTGCA TCAGCACGCG GACGGCGCGG TGGCCGAACA CAGCCATACT
CATGACGAAG CGGCCTGGGA GCCCGAAAAT GGCTGGCAGC GTGTGCTGTC CACCACCGGC
GGTAACCTGG TGGTCGCGGT GGGCTTCGCC CTGATGCTTG CCGGGCTTTA CACCCTGCGC
GCGCCGGGTC GCACCGTGCA AGGCGCATGG TGGGGGCTGG CGGGTTTTGC CGTGTTTGTG
CTGGCCCCGA CCCTTGGGCT GCCACCCGAA CTGCCAGGCA CAGCCGCTGC CGAGCTGAGT
CAGCGTCAGT TATGGTGGCT CGGCGCTGCC GCGTCGACTG CCGCCGGGCT GGCCTTGCTG
GTGTTCGGTC AGAACTGGCT GCTCAAAGCA CTGGGTGTGG CGATTTTGCT GGTCCCGCAT
GTGCTTGGCG CGCCACAGCC GCTGGTCCAT GAAAGCCTTG CTCCCGAGGC GCTGGAATCG
CAGTTCATGA TGGCCTCGCT GCTGACCAAC GCGCTGTTCT GGGTCGCGCT GGGATTGATC
AGTGCCTGGC TGTTCCGCAG AAACGATGTG CACAACGACA ATGTCGACCT GCATCAAGCC
TGA
 
Protein sequence
MFKRIAYTAG FTGLLAALLL TLLQSLWVVP LIQQAETYEN APAEQLHQHA DGAVAEHSHT 
HDEAAWEPEN GWQRVLSTTG GNLVVAVGFA LMLAGLYTLR APGRTVQGAW WGLAGFAVFV
LAPTLGLPPE LPGTAAAELS QRQLWWLGAA ASTAAGLALL VFGQNWLLKA LGVAILLVPH
VLGAPQPLVH ESLAPEALES QFMMASLLTN ALFWVALGLI SAWLFRRNDV HNDNVDLHQA