Gene Psyr_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3005 
Symbol 
ID3368525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3600896 
End bp3601687 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content63% 
IMG OID637653351 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_236077 
Protein GI66046236 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR02427] 3-oxoadipate enol-lactonase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCG TGCAACTCGC TGATGGTCAA CTGAACTACC TGCTCGAAGG CCCTGCGGGC 
GCGCCGGTGC TGGTCTTGTC CAATTCCCTG GGCACTGATC TGCACATGTG GGACAACCAG
GTGCCTGCCT TCAGCCGGCA CTTTCAGGTG TTGCGTTACG ACACGCGCGG CCATGGCAAA
TCGCTGGTCA GCGAGGGCAG TTACAGCATC GAGCAAAACG CTCGCGACGT GTTGGCGCTA
CTCGACGCGC TGGGCATCGA CAAGGCTTTC TTCTGCGGCC TGTCCATGGG GGGGCTGATC
GGCCAATGGC TGGCAATCAA TGCGCCGCAG CGCCTGCACA AGGTCGTTCT GTGCAATACG
GCCGCCAAAA TCGGCAACCC CGATGTCTGG AATCCTCGCA TCGAAACCGT GCTGCGTGAC
GGCCAGGCAG CCATGGTCGC GTTGCGCGAT GCCTCGATCG CACGCTGGTT CACACCATCC
TTCGCGGACG CCGAGCCTGC TGCCGTCGAC ACGGTCGTCG GCATGCTGGC ACGCACCTCG
CCACAGGGTT ACGCGGCCAA TTGCGCGGCT GTGCGCGATG CGGATTTCCG GGAGCAGATC
GCGTCCATCG AGCTGCCGGT GCTGGTGGTC TGTGGCACGC AGGATGCTGT AACGACCCCG
GCGGACGGGC GTTTCATGGT CGAACGGATT AAGGGAGCGC AGATCATCGA ACTGCACGCG
GCGCACCTGT CCAGTGTCGA AGCGGGTGAG GCATTCACTG TACCGGTGCT GGCATTTCTG
ACTGCCGAAT GA
 
Protein sequence
MSAVQLADGQ LNYLLEGPAG APVLVLSNSL GTDLHMWDNQ VPAFSRHFQV LRYDTRGHGK 
SLVSEGSYSI EQNARDVLAL LDALGIDKAF FCGLSMGGLI GQWLAINAPQ RLHKVVLCNT
AAKIGNPDVW NPRIETVLRD GQAAMVALRD ASIARWFTPS FADAEPAAVD TVVGMLARTS
PQGYAANCAA VRDADFREQI ASIELPVLVV CGTQDAVTTP ADGRFMVERI KGAQIIELHA
AHLSSVEAGE AFTVPVLAFL TAE