Gene Psyr_2989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2989 
Symbol 
ID3368509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand- 
Start bp3580939 
End bp3581913 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content61% 
IMG OID637653335 
Product6-phosphogluconate dehydrogenase-like protein 
Protein accessionYP_236061 
Protein GI66046220 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1023] Predicted 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating)
[TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.824676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTTG GGATTATTGG ACTGGGCCGT ATGGGCGGCA ACATCGCACG CCGTCTGATG 
CTGAATGGTC ACACGACTGT GGTGTACGAC CGTGATGAAG CATCGCGCAA CGCCCTGGCC 
AATGACGGTT CGACTGCGGT CGCAGACCTG AAGGAACTGG TCGGTGCGCT CGCCAGGCCC 
CGTGCTGTCT GGGTGATGCT CCCGGCCGGT GCGCCGACCG AAGAGACCAT TCAGACCCTC 
AGCCAGTTGC TCGACGCCGA TGACGTGATC ATCGATGGCG GGAATACCTT CTACAAGGAC 
GACATCCGGC GCGCTCAGGA ATTGACTGAA AAGGGCCTGC ATTACGTCGA TGTCGGCACA 
TCAGGCGGCG TTTGGGGTCT CGAACGTGGC TACTGCATGA TGATCGGAGG CGAGGCCGCC 
GTCGTCGAGC GCCTCGATCC GCTGTTCGCG ACACTGGCTC CAGGCCTCGG CTCGATCGAG 
CGCACCCGTG ACCGCACCTC GACCGATGAT CGTGCCGAAC GTGGCTATAT CCACTCCGGC 
CCTGCGGGTT CCGGGCATTT CGTGAAGATG ATCCACAACG GCATCGAATA CGGAATGATG 
CAGGCGTTCG CCGAAGGCTT CGATCTTCTC AAGCAGAAAA ACTCCGAACT CCTGCCGCCT 
GAGCAGCGTT TTGACCTGAA CACGGCGGAT ATTGCCGAAG TCTGGCGTCG TGGCAGTGTG 
GTGTCGTCCT GGCTGCTGGA TCTGACCGCC GACGCCCTGG CCACCGACCC TCACCTGGAT 
GCATTCTCCG GTTCGGTTGC CGACAGCGGT GAAGGTCGCT GGACCATCGA AGCGGCCATC 
GAGCAGGCGG TTCCGGTTCC TGTGCTGTCC AGCGCCCTGT TTGCGCGTTT CCGTTCCCGC 
CAGACAAGCT CGTACGCAGA CAAGATGCTG TCCGCCATGC GCTTTGGATT TGGTGGCCAC 
AAGGAACCCA AGTAA
 
Protein sequence
MQLGIIGLGR MGGNIARRLM LNGHTTVVYD RDEASRNALA NDGSTAVADL KELVGALARP 
RAVWVMLPAG APTEETIQTL SQLLDADDVI IDGGNTFYKD DIRRAQELTE KGLHYVDVGT 
SGGVWGLERG YCMMIGGEAA VVERLDPLFA TLAPGLGSIE RTRDRTSTDD RAERGYIHSG 
PAGSGHFVKM IHNGIEYGMM QAFAEGFDLL KQKNSELLPP EQRFDLNTAD IAEVWRRGSV 
VSSWLLDLTA DALATDPHLD AFSGSVADSG EGRWTIEAAI EQAVPVPVLS SALFARFRSR 
QTSSYADKML SAMRFGFGGH KEPK