Gene Psyr_2975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2975 
Symbol 
ID3368495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3567794 
End bp3568357 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content56% 
IMG OID637653321 
ProductAlkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_236047 
Protein GI66046206 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID[TIGR03137] peroxiredoxin 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.244311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.019621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATCA TCAACAGCCA AGTAAAACCG TTCAAGGCTA CCGCATTCAA GAACGGCGCT 
TTCGTTGACG TCTCGGACGC TGACTTCAAA GGCAAGTGGT CTGTCGTATT CTTCTACCCG
GCCGACTTCA CCTTCGTATG CCCGACCGAG CTGGAAGACC TGGCTGACAA CTACGAAGAG
TTCAAGAAGC TGGGCGTTGA GATCTACAGT GTCTCGACTG ACACCCACTT CGCTCACGCT
GCATGGCACA ACACTTCGCC AGCCATCGGC AAGATCCAGT ACACCATGAT CGGTGACCCG
ACCCTGACCA TCTCCCGCAA CTTCGACGTA CTGATCGAAG AAGCCGGTCT GGCGGATCGC
GGTACTTTCG TGATCAACCC TGAAGGTCAG ATCAAAATCG TCGAGCTGAA CGACGGCGGT
GTTGGCCGTG ACGCTTCCGA GCTGCTGCGC AAGATCAAGG CTGCTCAGTA CGTTGCCGCT
CACCCGGGCG AAGTCTGCCC AGCCAAGTGG AAAGAAGGCG AAGCTACTCT GGCTCCGTCC
CTGGACCTGG TTGGCAAGAT CTGA
 
Protein sequence
MPIINSQVKP FKATAFKNGA FVDVSDADFK GKWSVVFFYP ADFTFVCPTE LEDLADNYEE 
FKKLGVEIYS VSTDTHFAHA AWHNTSPAIG KIQYTMIGDP TLTISRNFDV LIEEAGLADR
GTFVINPEGQ IKIVELNDGG VGRDASELLR KIKAAQYVAA HPGEVCPAKW KEGEATLAPS
LDLVGKI