Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2975 |
Symbol | |
ID | 3368495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3567794 |
End bp | 3568357 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637653321 |
Product | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_236047 |
Protein GI | 66046206 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.244311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.019621 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTATCA TCAACAGCCA AGTAAAACCG TTCAAGGCTA CCGCATTCAA GAACGGCGCT TTCGTTGACG TCTCGGACGC TGACTTCAAA GGCAAGTGGT CTGTCGTATT CTTCTACCCG GCCGACTTCA CCTTCGTATG CCCGACCGAG CTGGAAGACC TGGCTGACAA CTACGAAGAG TTCAAGAAGC TGGGCGTTGA GATCTACAGT GTCTCGACTG ACACCCACTT CGCTCACGCT GCATGGCACA ACACTTCGCC AGCCATCGGC AAGATCCAGT ACACCATGAT CGGTGACCCG ACCCTGACCA TCTCCCGCAA CTTCGACGTA CTGATCGAAG AAGCCGGTCT GGCGGATCGC GGTACTTTCG TGATCAACCC TGAAGGTCAG ATCAAAATCG TCGAGCTGAA CGACGGCGGT GTTGGCCGTG ACGCTTCCGA GCTGCTGCGC AAGATCAAGG CTGCTCAGTA CGTTGCCGCT CACCCGGGCG AAGTCTGCCC AGCCAAGTGG AAAGAAGGCG AAGCTACTCT GGCTCCGTCC CTGGACCTGG TTGGCAAGAT CTGA
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Protein sequence | MPIINSQVKP FKATAFKNGA FVDVSDADFK GKWSVVFFYP ADFTFVCPTE LEDLADNYEE FKKLGVEIYS VSTDTHFAHA AWHNTSPAIG KIQYTMIGDP TLTISRNFDV LIEEAGLADR GTFVINPEGQ IKIVELNDGG VGRDASELLR KIKAAQYVAA HPGEVCPAKW KEGEATLAPS LDLVGKI
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