Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2926 |
Symbol | |
ID | 3368446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3514660 |
End bp | 3515865 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653272 |
Product | major facilitator transporter |
Protein accession | YP_235998 |
Protein GI | 66046157 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0235269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.894143 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTACAG ATGAGAAGCA GGGCAAAACA CTCCCTCTGG GGGCGTTGCT GGCGCTGGCA ATGACGGGGT TCATCTGCAT CGTCACCGAG ACCTTGCCTG CGGGTTTGTT GCCGCAGATC GCCGATGGGC TGGACGTGTC CGCATCATTT GCCGGGCAGA TGGTGACTGT TTATGCGCTG GGTTCATTGC TGGCCGCCAT TCCACTGACG ATCGCGACGC AAAGCTGGCG GCGCAGAACG GTCTTGCTGG TGACGATTAT CGGCTTTCTG GTTTTCAACA GCGTCACCGC GTTGTCGTCC AGTTACGGAC TGACCCTGAT CGCAAGGTTT TTCGCAGGCG TCTCGGCGGG CCTGGCGTGG AGCCTCATCG CCGGTTACGC ACGGCGCATG GTGGTCCCGC AACTGCAAGG GCGCGCATTG GCCGTGGCGA TGGTCGGCAC GCCTATCGCC TTGTCGCTGG GCGTACCGCT GGGAACCTGG CTTGGCGGGT TCATGGGCTG GCGCATGGCG TTTGGCCTGA TGTCCGGGAT GACCGTGCTG TTGATCATCT GGGTGCTGGT CAAAGTGCCG GACTATCCGG GCAAGTCCTC CTCACAGCGC ATGGCGTTAC GTCAGGTCTT TTTCACGCCC GGCGTACGCT CGGTGCTGGG CGTGGTTTTC ACCTGGATGC TGGCTCATAA CCTGCTTTAC ACCTACGTCG CTCCATTCGT TTCCGCGGCG GGGCTGGCGA ATGATGTGGA CCTGGTATTG CTGGCATTCG GGGTCGCCGC ACTGGCTGGC ATCTGGGTTA CGGGACGGTT GGTTGATCGC CATCTGCGCA AGACGGTGCT TGCCAGCCTG GCAACCTTCG CAGCGGTGTC AGTGTTTTTC GGCGTGTTCT CCGGCTCTGC AACGGCCATT TACATCGGTG CTTTTATCTG GGGCTTGACC TTCGGTGGCG CCGCCACACT GCTGCAAACC GCGCTCGCCG ATTCGGCAGG CGCGGGCGCA GATGTGGCGC TTTCGATGAA CGTCGTGGTC TGGAACAGCG CGATCGCAGG CGGCGGGTTA CTGGGTGGCG TGTTGCTTGG CCAATGGGGT GCGGGATCCT TTCCTTGGGT CTTGCTGATG CTGTTGTTGC TAAGTCTGGT GATCGCACTG CGCGCAGGTG CTCATGGTTT TGCACGGGGC AGCCGGCTGG ACCGGGAGCA TGTTTTGGCT GGGTGA
|
Protein sequence | MTTDEKQGKT LPLGALLALA MTGFICIVTE TLPAGLLPQI ADGLDVSASF AGQMVTVYAL GSLLAAIPLT IATQSWRRRT VLLVTIIGFL VFNSVTALSS SYGLTLIARF FAGVSAGLAW SLIAGYARRM VVPQLQGRAL AVAMVGTPIA LSLGVPLGTW LGGFMGWRMA FGLMSGMTVL LIIWVLVKVP DYPGKSSSQR MALRQVFFTP GVRSVLGVVF TWMLAHNLLY TYVAPFVSAA GLANDVDLVL LAFGVAALAG IWVTGRLVDR HLRKTVLASL ATFAAVSVFF GVFSGSATAI YIGAFIWGLT FGGAATLLQT ALADSAGAGA DVALSMNVVV WNSAIAGGGL LGGVLLGQWG AGSFPWVLLM LLLLSLVIAL RAGAHGFARG SRLDREHVLA G
|
| |