Gene Psyr_2922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2922 
Symbol 
ID3368442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3510456 
End bp3511925 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content63% 
IMG OID637653268 
Productpermease for cytosine/purines, uracil, thiamine, allantoin 
Protein accessionYP_235994 
Protein GI66046153 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1457] Purine-cytosine permease and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.185419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.664118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAT CGTCCCCCTC TCAAGGTGCG GGTCAGCTGG AAACCCGCGG TATCGAGCCG 
GTTCCTGAAA ACGAATGCAA CGGCCACCCG CTGCAGTTGT TCTGGGTCTG GTTCGCCGCC
AATATCAGCA TCCTCGGCTT GCCGCTCGGT GCCACCCTGG TGGCGTTCCA GGGGCTGGCC
ATCTGGCAGG CAATTATCGT CGCCATCCTC GGTGCCGCCG GCTCTTTCGC CGTGGTGGGC
GTGATCTCCA TTGCCGGGCG CCGCGGGCGA GCCCCGAGCC TGACGCTGTC CCGGGCCATC
TTCGGGGTAC GAGGCAATAT CGGTCCCACG CTGGTTTCGC TGATGTCGCG TCTGGGCTGG
GAAACGGTCA ACACCACCAC CGCCGCTTTC GTCCTGCTGT CACTGTTCGC AATCCTTTTC
GGCACCCCCG TGAAGGCGAA AAACTCGCCT GGCCTGACCC TGGTGTTCAT CGCCTTATTC
GTACTGCTGA CCCTGACCGT CTCGGGTTTG GGCCATGCCA CCTTGCTGGT CATCCAGAAA
TGGGCGACTT ACCTGTTTGG CGCTCTGAAC CTGGTGGTCG GTGGCTTTCT ACTCACCCAC
ATCGATTGGA GCCTGGTCTT CGACGCGCCG GCAGCGCCAC TGAGTGCCAT GATTATTGGC
GTCGGCACCA TGGCCGCAGG CACCGGTATC GGTTGGGCCA ATGCGGGCGC CGACATGTCG
CGCTATCAGC ACGCCAGCGT GAAGGCCACT CGCCTGGTGG CCTCGGCGGC ACTTGGCGCA
GGGATCCCTC TGGTTTTGCT GATCACCCTC GGCGGCTTGC TGTCGGTGGG CAACGATCAT
CTGGCGTCAG CCACCGACCC GATCATCGCC ATTCGCGAGA TGTTGCCCAC CTGGATGGCC
GTGCCCTACC TGATCACGGC GTTCGGCGGC CTGCTGTTGT CCAACAACCT GTCGGTCTAC
TCGGCCGGCC TGACGACCTT GACCCTCGGC CTGAAGGTCA AGCGAGTACA CGCAGTCATC
GTCGATATCA TCGCGATCTT TGCCGGTTCG ATCTACTTCA TGCTGATCGC CGACAGCTTC
TACGGCCCCT TCATTACGTT CATCTCGATG TTGGCAGTGC CCATTACCGC GTGGGTCGGC
ATCTTTGTCG TCGACCTGCT GCACCGCCAC ATCTACTCCC CAAAAGACCT GCTGGACCAG
ACCCCACGCA GCGCTTACTG GTATCGCGGC GGCGTCGAAT GGCGCGCGCT GGGCTCGTGG
GCATTGGCAA TCGTGCTTGG CTTCAGCTTC ACCACCGTGG CCACCACCCC GGAGCATGTG
CTGTTCAAAG GCTTCCTCGC CGATTCCTGG CTGGGCCATA ACGGCCTGGG CTGGATCGTG
ACCTTCATTG TCGCCGGTGG CCTGTATGCG CTGCTCGGCG GGGCGCGTGA TCGCCGTGTC
GTTACCGAAG AGGCTGCCCA TGCCCGCTAA
 
Protein sequence
MTTSSPSQGA GQLETRGIEP VPENECNGHP LQLFWVWFAA NISILGLPLG ATLVAFQGLA 
IWQAIIVAIL GAAGSFAVVG VISIAGRRGR APSLTLSRAI FGVRGNIGPT LVSLMSRLGW
ETVNTTTAAF VLLSLFAILF GTPVKAKNSP GLTLVFIALF VLLTLTVSGL GHATLLVIQK
WATYLFGALN LVVGGFLLTH IDWSLVFDAP AAPLSAMIIG VGTMAAGTGI GWANAGADMS
RYQHASVKAT RLVASAALGA GIPLVLLITL GGLLSVGNDH LASATDPIIA IREMLPTWMA
VPYLITAFGG LLLSNNLSVY SAGLTTLTLG LKVKRVHAVI VDIIAIFAGS IYFMLIADSF
YGPFITFISM LAVPITAWVG IFVVDLLHRH IYSPKDLLDQ TPRSAYWYRG GVEWRALGSW
ALAIVLGFSF TTVATTPEHV LFKGFLADSW LGHNGLGWIV TFIVAGGLYA LLGGARDRRV
VTEEAAHAR