| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2916 |
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| Symbol | |
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| ID | 3368436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3504820 |
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| End bp | 3505764 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637653262 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_235988 |
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| Protein GI | 66046147 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.056066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0916601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAC TGATTGGCTG CAGCGTGCTT GCACTTGGCG CCAGCGCTCT GTTGAGCAGC
AATGTAATGG CAGTTGATGC CGCTTCATGC CAGAACGTGC GCATGGGTGT AGTGAACTGG
ACCGACGTGA TCGCAACCAG CGCCATGACC CAAGTGTTGC TCGACGGCCT CGGTTACAAG
ACCAAACAGA CCAGCGCGTC CCAGCAAATC ATTTTCGCCG GCATCCGCGA CCAGCGCCTG
GATCTCTTTC TGGGCTACTG GAACCCGCTG ATGACCCAGA CCATCGCGCC GTTTGTCGAG
GCCCGGAAAG TCAAAGTGCT CGACAAACCG AGCCTGGAAG ACGCTCGCGC CACCCTCGCC
GTGCCGACTT ACCTGGCGGA CAAGGGCCTG AAGTCCTTTG CCGATATCGC CAGGTTCGAG
AAGGAACTGG GCGGCAAAAT CTACGGCATC GAGCCTGGTT CAGGCGCCAA TACCCAGATC
AAGGCGATGA TCGCCAAAAA CCAGTTCGGT CTGGGCAAAT TCCAGCTGGT GGAGTCCAGC
GAAGCCGGCA TGCTCGCCGC CGTGGACCGC GCCGTACGCC GCAAGGAAGC CGTGGTGTTT
TTCGGCTGGA CGCCGCACCC GATGAACGTC AACGTGGCGA TGACTTACCT CAATGGCAGC
GACGACGCCC TGGGCCCGAA CGAGGGCATG GCCACTGTGT GGACGGTCAC TTCGCCGACT
TATGCCGAAC AGTGCCCCAA CGTGCACAAA TTGCTGACTA ACCTGACGTT CACCGCCGCC
GACGAGAGCC GGATGATGCA GCCGCTACTG GATCACAAGG ATGCTCTTGA GTCCGCCAGA
CAATGGCTCA AAGACCATCC GCAAGACCAG GCGCGCTGGC TGGAAGGCGT CACCACCTTC
GACGGCAAAC CGGCTGCGGC AAACCTTCAA TCGAGCAGCC AATAA
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| Protein sequence | MNRLIGCSVL ALGASALLSS NVMAVDAASC QNVRMGVVNW TDVIATSAMT QVLLDGLGYK
TKQTSASQQI IFAGIRDQRL DLFLGYWNPL MTQTIAPFVE ARKVKVLDKP SLEDARATLA
VPTYLADKGL KSFADIARFE KELGGKIYGI EPGSGANTQI KAMIAKNQFG LGKFQLVESS
EAGMLAAVDR AVRRKEAVVF FGWTPHPMNV NVAMTYLNGS DDALGPNEGM ATVWTVTSPT
YAEQCPNVHK LLTNLTFTAA DESRMMQPLL DHKDALESAR QWLKDHPQDQ ARWLEGVTTF
DGKPAAANLQ SSSQ
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