Gene Psyr_2893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2893 
Symbol 
ID3368412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3472035 
End bp3472703 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content58% 
IMG OID637653238 
Productlipoprotein 
Protein accessionYP_235965 
Protein GI66046124 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000297735 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.82105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTACG TTAAACAGAT GAAGGTGTCC GTGCTTTTGT TGTTGGGATT TCTGGCCGCG 
GGGTGTGCCA GCCACGAACC GTCCCCTTAC TCGGGCATAG AGTCCTCGCT CGAAATGCGG
CCTAACGAGC AGGACAGTAC CGGGCGTATA CCGTTTAAAT ACACCACCGC AGTCAACTGG
AATAAATACG ATCAAATCAT GCTTGAGCCC GTGGTGATTT ACACGGGAGT GGATGCCCAG
TTTTCCGGGC TGGAGCGCAA GGACCGCATA ACCCTGGCCA ACGACATGAC GGTCAAGTTC
TCCGAGGCCT TGGGGCGACA CTTTCGATTC ACCGCCACGC CGGGGCGCGG TACGTTGAGG
ATTCGCCTCA CGCTGACCGG GGCCGAGACC ACTGTCGCCG GGCTGTCGAC GTTCTCCAGA
TTCGATATCG GCATGGGCTC TTATAACCTG TTTCAGGCGG CCCGAGATCG TAAGGGGACT
TTTACCGGCT CCGTGAGTTA TGCCGTCGAG ATCTACGACG CGTCCACTTC GCAACTGCTG
GCGTCCTATG TCACCCGGCA GTATCCGAAG GTCTATGACA TCGGCTCAAC CTTCGGAAGT
CTGTCGGCGG CGCAGGCCGG CATTTCGAGA GGGGCGGACG AGCTGGTCGA GCTTCTGCTC
TCGAAGTAG
 
Protein sequence
MHYVKQMKVS VLLLLGFLAA GCASHEPSPY SGIESSLEMR PNEQDSTGRI PFKYTTAVNW 
NKYDQIMLEP VVIYTGVDAQ FSGLERKDRI TLANDMTVKF SEALGRHFRF TATPGRGTLR
IRLTLTGAET TVAGLSTFSR FDIGMGSYNL FQAARDRKGT FTGSVSYAVE IYDASTSQLL
ASYVTRQYPK VYDIGSTFGS LSAAQAGISR GADELVELLL SK