Gene Psyr_2720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2720 
Symbol 
ID3368237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3302344 
End bp3303318 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content64% 
IMG OID637653068 
ProductUrea amidolyase-related protein 
Protein accessionYP_235797 
Protein GI66045956 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.592152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.72713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGG TGCTCAAACC CGGTCTGGCC ACCTCGGTTC AGGACCTCGG TCGCGAGGGC 
TATTATCACC TGGGCATTCC GCCCTCCGGT GCGCTCGACC AGTACGCCCT CAGCGCCGCC
AATCAGCTGG TCGGGAATCC ACCCGGCGCT GCCGGGCTTG AATGCACGCT GCTGGGACCG
GAACTGGAGT TTCAGTGCGA TACGTTGGCT GCGGTCTGCG GCGCACACAT GGCGGCGCGC
CTCGACGGTG TGGAAATGCA CCACGACACC GCCTTTGCGG TGAAGGCCGG GCAAGTGCTG
CGTTTCGACT TCCCCAAGGA CGGTGCGCGC ACCTATCTGG CCGTCGCCGG CGGCATTGAT
GTGCCGCTGG TGCTGGGCAG CCGTTCGACT TACACGTTGG GTGCACTTGG CGGTTTTCAG
GGTCGTAGAC TGGCCGCTGA TGACCAGTTG CCGATAGGCA CGCCAAGCGG CAAGGGACGT
GCCGGGGCCA GCCTGCCGAT GGCCTTGCGC CAGTCTCTGG GTGGTGAGGT GTATCTGCGG
GTCGTGCCGG GCCTGTATTA CGAGCGCCTG ACCGAATTTG CTGCCACCAG TTTTTTCTCC
GAGCCCTGGA GCGTAGGGTC GGAAGCCGAC CGCATCGGTT ATCGCTTCAA GGGGGGCAGG
GCGCTGACCT TCCAGCCCAG GGAGCAGCCC TTCGGCGCCG GTTCCGATCC ATCCAATATC
GTCGACAGCT GCTACCCGAT CGGTTCGATT CAGGTGCCTG CCGGGCTGGA ACCGATTGTG
TTGCACCGTG ATGCGGTGTC GGGCGGGGGC TACGCGATGA TCGGCACGGT GATCAGCGCG
GACCTGGATC TGATCGGTCA GATGCAACCC AATCAGACCG CCCGATTCGT GGCCGTAACG
CTGGAGGAGG CGCTGGAGGC GCGCAAGTCA TACAAGAAGA AGCTGGCGTG CCTGAGCAAA
CTGTTTCCTT CCTGA
 
Protein sequence
MIKVLKPGLA TSVQDLGREG YYHLGIPPSG ALDQYALSAA NQLVGNPPGA AGLECTLLGP 
ELEFQCDTLA AVCGAHMAAR LDGVEMHHDT AFAVKAGQVL RFDFPKDGAR TYLAVAGGID
VPLVLGSRST YTLGALGGFQ GRRLAADDQL PIGTPSGKGR AGASLPMALR QSLGGEVYLR
VVPGLYYERL TEFAATSFFS EPWSVGSEAD RIGYRFKGGR ALTFQPREQP FGAGSDPSNI
VDSCYPIGSI QVPAGLEPIV LHRDAVSGGG YAMIGTVISA DLDLIGQMQP NQTARFVAVT
LEEALEARKS YKKKLACLSK LFPS