Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2716 |
Symbol | |
ID | 3368233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3298441 |
End bp | 3299715 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653064 |
Product | mandelate racemase/muconate lactonizing protein |
Protein accession | YP_235793 |
Protein GI | 66045952 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0734376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.775663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAATCA TCCGTGTAAC CGTGACCCCT ATCGCCTTTC GCGACCCGCC GTTGCTCAAC GCCAGTGGTA TTCACGAACC CTTTGCCCTG CGCTCGATCA TCGAGGTGGA AAGCGACAAC GGCTACATCG GCCTCGGTGA AAGCTATGGT GATGCCCCGG CACTGGCGAT TCAGCAACAG GTGCAGACCC AGCTGATCGG GCTCGACCCG TTCAACCTCA ATCAGCTGCG CAGCATCGTG CAGGCGACCG TGGCGGCGCA TAAGCCTGCC AGCCTGGCCG GTGCCGAACT GGCGCCGGGC TCACACGCCA GCAAGGCGGT CAGCAATGCT TATTCTGCGT TCGAAGTAGC GTTTCTGGAC CTGCAGGCAC GTTCCATGAA CCTGCCACTG GTGGACCTGC TCGGCGGTGC CATTCGTGAC CAGATACCCT TCAGCGCCTA TCTGTTCTTC AAATATGCGC AGCATGCCGA TGCGCCTTAC GCGCCCGACA GCTGGGGTGA AGCGCTCAGC GAAGAGCAGA TCGTCGCCCA GGCCCGGCGC ATGATCGACG CCTACGGTTT CAAAAGCATC AAGCTCAAGG CCGGTGCACT GCAGCCGGAA CACGAGGTGT CGTGCATCAA GGCGCTGAAA AAAGCGTTTC CCGGTTACCC GCTGCGCATC GACCCCAACG GCAACTGGTC ACTGGAGACC TCGATTCGGA TGGCCGAACT GCTGGGCGAT GATCTGCAAT ATTACGAAGA CCCGACGCCC GGCCTCGACG GCATGTCCGA ATTGCACAAA CGCACCGGAC TGCCGCTGGC GACCAACATG GTGGTGACCG ATTTCGACGA GTTCCGCCGC AGCGTGGCAC TGGACAGCGT GCAGATCGTG CTCGCCGACC ACCATTACTG GGGCGGCCTG CGCGACACTC AGGCGCTGGC GAAGATGTGC GAAACCTTTG GCCTGGGCGT GTCGATGCAC TCCAACTCGC ATCTGGGCAT CAGCCTCATG GCCATGGCCC ACGTCGCAGC GTCGGTGCCC AATCTGGACT ACGCCTGCGA CACGCACTAC CCGTGGCAGG AACCGGACGA GGAAGTCATC AAGGGCGGCA AACTGCCGAT TGTCGACGGC TGTGTCAGCA TCACCCGCGC CCCTGGCATG GGGCTGGAAC TGGACTACGA CCAGCTCGGC AAGCTCAACG ACCAGTACCA CAGCTGTGGC ATCCGGCAGC GCGATGATGT GAAGCAGATG CAGAAGTACA ATCCGGACTG GAAGGCGGTC AAGCCAAGAT ACTGA
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Protein sequence | MKIIRVTVTP IAFRDPPLLN ASGIHEPFAL RSIIEVESDN GYIGLGESYG DAPALAIQQQ VQTQLIGLDP FNLNQLRSIV QATVAAHKPA SLAGAELAPG SHASKAVSNA YSAFEVAFLD LQARSMNLPL VDLLGGAIRD QIPFSAYLFF KYAQHADAPY APDSWGEALS EEQIVAQARR MIDAYGFKSI KLKAGALQPE HEVSCIKALK KAFPGYPLRI DPNGNWSLET SIRMAELLGD DLQYYEDPTP GLDGMSELHK RTGLPLATNM VVTDFDEFRR SVALDSVQIV LADHHYWGGL RDTQALAKMC ETFGLGVSMH SNSHLGISLM AMAHVAASVP NLDYACDTHY PWQEPDEEVI KGGKLPIVDG CVSITRAPGM GLELDYDQLG KLNDQYHSCG IRQRDDVKQM QKYNPDWKAV KPRY
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