| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2683 |
|---|
| Symbol | |
|---|
| ID | 3368200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 3257181 |
|---|
| End bp | 3258608 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637653031 |
|---|
| Product | arginine/ornithine antiporter |
|---|
| Protein accession | YP_235760 |
|---|
| Protein GI | 66045919 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACGC CCCCTGGAAA ACTGAGATTG GGTGCTTTAG TCGCTCTGGT GGTCGGCTCA
ATGATTGGTG GAGGAATCTT TTCCCTGCCA CAGAATATGG CCGCCAGTGC AGAAGTAGGT
GCTGTGCTGG TTGGCTGGGC CATCACCGCA ATTGGCATGC TGACGCTGGC ATTCGTTTTT
CAAACGCTGG CGAATCGCAA GCCCGATCTG GACGGTGGTG TCTACGTTTA CGCCAAGGCT
GGTTTCGGCG ACTACATGGG GTTCTCGTCC GCGTGGGGAT ACTGGATCAG CGCGTGGCTC
GGCAATGTGG GTTACTTCGT ACTGTTGTTC AGTACGCTGG GTTACTTTTT TCCTGTTTTT
GGAGAGGGCA ATACGGTTGC GGCGGTGATC GGGGCGTCAG TGTTGCTCTG GGGCGTGCAT
TTTTTGGTGT TGCGCGGCAT TCAGGAAGCA GCATTTATCA ATCTGGTGAC GACCGTTGCC
AAAGTGGTGC CGCTCATTTT ATTCGTTTTG ATAGCGGTCT TTGCATTCAA GCTGGATATT
TTTACGACTG ACATCTGGGG CTTGGAAAAA CCGGACATGG GCAGCGTGAT GAACCAGGTT
CGCCATATGA TGCTGGTGAC GGTATGGGTA TTCATCGGTA TTGAAGGTGC CAGTATCTTT
TCTGCTCGGG CCAGCAAACG CAGTGATGTC GGCAAGGCGA CGGTCATCGG TTTCATTACC
GTATTGCTGT TGCTGGTCCT GGTGAACGTA TTATCACTGG GGGTCATGAC CCAACCGGAA
CTGGCCAAAC TGCAAAACCC GTCAATGGCG GCTGTGCTCG AACATATAGT GGGTCCGTGG
GGGGCTGCGC TGATCAGTGT AGGGCTGATC ATTTCGCTGC TTGGGGCTTT GCTGTCATGG
GTGTTGCTCT GCGCCGAAAT AATGTTCGCT GCCGCTAAAG ACCATACAAT GCCCGAGTTT
CTAAGCCGCG AAAATGCCAA TCATGTGCCT GCCAATGCGC TGTGGCTGAC TAACGCGATG
GTGCAGGTTT TCCTGGTCAT CACCCTCTTC TCGTCCAGTA CTTACCTGTC GCTGATCTAC
CTGGCCACGT CGATGATCCT GATTCCTTAT CTGTGGTCTG CCGCGTATGC CCTGCGCCTG
GCGATAGGAG GTGAAGGTTA TGAAAACGCC AGACGCGAGC GCCGGAAAGA TCTGTTCATC
GCGGCCGTCG CGCTTCTTTA TGCCATTTGG TTGATATACG CCGGCGGCGT CAAATACCTG
TTGCTCTCTG CCCTCCTCTA CGCCCCCGGT GTGATCCTTT TCGCGAAGGC AAAACTCGAG
GCAAAAAAAC CGGTGTTCAC CCACCTGGAA AACATGATGT TCGTTGCCGT TCTTATAGGC
GCTCTTATAG CGGCGTATGG GCTATATGAC GGCTTCCTTA CCCTCTAA
|
|---|
| Protein sequence | MSTPPGKLRL GALVALVVGS MIGGGIFSLP QNMAASAEVG AVLVGWAITA IGMLTLAFVF
QTLANRKPDL DGGVYVYAKA GFGDYMGFSS AWGYWISAWL GNVGYFVLLF STLGYFFPVF
GEGNTVAAVI GASVLLWGVH FLVLRGIQEA AFINLVTTVA KVVPLILFVL IAVFAFKLDI
FTTDIWGLEK PDMGSVMNQV RHMMLVTVWV FIGIEGASIF SARASKRSDV GKATVIGFIT
VLLLLVLVNV LSLGVMTQPE LAKLQNPSMA AVLEHIVGPW GAALISVGLI ISLLGALLSW
VLLCAEIMFA AAKDHTMPEF LSRENANHVP ANALWLTNAM VQVFLVITLF SSSTYLSLIY
LATSMILIPY LWSAAYALRL AIGGEGYENA RRERRKDLFI AAVALLYAIW LIYAGGVKYL
LLSALLYAPG VILFAKAKLE AKKPVFTHLE NMMFVAVLIG ALIAAYGLYD GFLTL
|
|---|
| |