Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2659 |
Symbol | |
ID | 3368176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3230030 |
End bp | 3231307 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637653007 |
Product | hypothetical protein |
Protein accession | YP_235736 |
Protein GI | 66045895 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2856] Predicted Zn peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00418802 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCAA CAGTGCTCAG TACTTTCGCC AAAGGTGATC TCTTCGAGGA GCAGGTTTTC CAATTCCTGA GTCGCGAGAT CGATGAAGGG CGGTTTTTTT GCCGGCCTGA GCATTGCCAG ATATTCAGGA AGAGACGCTA TTACTCCCGT GATCGAGAAG ACGATATCGT TTTTGACATT GCCATAGAGA TCTTCCTTCC TGACCAACCT AAGCCGTCAA TAATTGTCCT TGTCGAATGT AAGAATTATG CGGGCACCGT TCCGGTTGGA GATATCGAGG AGTTTGGGGC CAAGATCCGC CAAGTCACAG GATTCAATGC AAAAGGGATA TTCGTATCGT CAAGCGCCTT CCAGTCCGGC ACGATCAATA TCGCCAGGAA TCAGGGTTTC GGTGTTATTC GGTATTTTCC GGACGAAGGC TTCCAATGGG AGCTGGCTCG CGCCCTCCTC ACGGGCGTGA GAAATGCATC ATCGCGAAAG CGTGCTGAAA TTGAGTACGC TCTGACCCAG CCTGGCTTTC GGCCGACTCT CACGGGAGCT TATGCTGTCA CCCCAGGGGG CTACACCAAT GCTTGGGAGG GGATCTGGAC AGGGCTCGAT CTGGCTGGCA GTTTCGATCC AGCTATATTG GAAATCATTC GGCCTCCTCA CCTGCCAGTC CTTAGAATTG GCTATCTCTC TAAGGGAGCA ATTGAAAATC TGTCAGAGCA GGTTTTGGGA TCTGCCGGTT ATACAAGGGG GGTAGTAGAT CTGGAAGCCG TAGTCGCTGG TGCGACCACG TCGAGTGTCT TGACCGTTAG CTACGTAGAT GAACCAGATG GTGCTTTAGG TAGGATCAGC TTTGCCCCCT TAGAGATAAA AATCAATTCT CGCGACAAAA CAGCCCCGAT GACCCGGTTC ACGCTTGCTC ACGAGCTGGG GCACTATTAT CTCAATCACG GCCGCTACAT TGCACGGGAG AGCCTACGTT CGAAGGACAT TGATCAGTTT GAGCGCATCG CTGTCCCCAA AAGCGAATTG GAACGCCTCG AATGGCAAGC GAATACATTT GCGTCTTACC TACTGATGCC TGAACGGCAT TTTCTCGAAG CTTTCTCGCT TCTGGTTGAG CACCACGATA TTCGCAACCG AGGACATGGC GCCCTTTTTC TCGATGACCA GCGTGACAAC ATCAGAAATT ATCACTTGGT GCTGGACGCG CTGAGCCGAT ATTTTGCTGT TTCTAAAAGC GCAGCGGCCA TCCGTTTGCG AGGCCTTGGA GTCTTAGTCG AAGCCTGA
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Protein sequence | MEPTVLSTFA KGDLFEEQVF QFLSREIDEG RFFCRPEHCQ IFRKRRYYSR DREDDIVFDI AIEIFLPDQP KPSIIVLVEC KNYAGTVPVG DIEEFGAKIR QVTGFNAKGI FVSSSAFQSG TINIARNQGF GVIRYFPDEG FQWELARALL TGVRNASSRK RAEIEYALTQ PGFRPTLTGA YAVTPGGYTN AWEGIWTGLD LAGSFDPAIL EIIRPPHLPV LRIGYLSKGA IENLSEQVLG SAGYTRGVVD LEAVVAGATT SSVLTVSYVD EPDGALGRIS FAPLEIKINS RDKTAPMTRF TLAHELGHYY LNHGRYIARE SLRSKDIDQF ERIAVPKSEL ERLEWQANTF ASYLLMPERH FLEAFSLLVE HHDIRNRGHG ALFLDDQRDN IRNYHLVLDA LSRYFAVSKS AAAIRLRGLG VLVEA
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