Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2592 |
Symbol | |
ID | 3368109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3038676 |
End bp | 3039707 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637652940 |
Product | transport system permease protein |
Protein accession | YP_235669 |
Protein GI | 66045828 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0169021 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAGC ATTTCACCGT GCGCTACCGG AGCTTTTCCC GGCAGTTCAG CCTGACCGCA TTGACGCGCT TGCTTTCGGG CCTGGCGCTG ACGCTGCTGG TCGTACTGAG CTCGTTGGCC GTGGGCAAGA TCAATCTGTC GCCCGCGACC CTGCTGAGTG TTTTTACCGG TCAGGCAGAT GCCAGCCTGG TCTTCATCGT CGAACAGCTG CGCATGCCCC GGCTGGCCCT GGCCGCCCTG GTCGGCGCAG CACTGGCAGT GTCCGGGCTG ATCCTGCAAA GCATCATTCG CAACCCGCTG GCCTCACCTG ATCTGTTAGG CATCACCAGC GGTGCCAGCG CCGCCGCCGT GTTGTACCTG TCATTCTTCT CGGCTGCACT GGGCGCGCAG TTTCTACCCC TGGCGGCGAT CTCCGGCGCA GGCCTCGCGG CACTGGTCAT TTATCTGCTG GCCTGGAATC AGGGCGCTTC ACCCTTGCGC ATGGTGTTGA TCGGGGTAGG GGTGTCGGCT CTGCTGGCTG CGGTGACCAC GTTCATTCTG GTGTTCAGCC CGTTGACCAC CACCTTGTCG GCTTATGTCT GGCTGACCGG GAGCGTGTAT GGTGCCAGTT GGCCAGAGCC CCGCGCGCTG GCCGGCTGGC TGCTTATGAC ATTGCCGCTG CTGGCACTGC TCGCCCGTCA GGTGCGCATG CAGCAACTGG ATGACGCGCT GGCCCAGGGA ATCGGCGTGC GCGTGCAATG GCTGCGCGCC GGTTTGCTGT TGGTGAGCGT CGCGCTGGCC GGGCTGGCGG TCGCGTGGGG CGGGGCGATT GCCTTTGTCG GGCTGATCGC GCCTCATATC GCCAAACGCC TGATGCCGCC GGGGTTCGTG GGGCAAGCGC TGATGGCGGC GTTGATCGGT GCCAATCTGG TGATGCTTGC CGATCTGGCC GGACGCACGC TGTTCCTGCC GCTGGATCTG CCCGCAGGGA TTTTTGTCGC GGTGCTGGGC ACACCGTTTT TTCTGTACCT ATTGATCAAC CAGCGGCATT AA
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Protein sequence | MDKHFTVRYR SFSRQFSLTA LTRLLSGLAL TLLVVLSSLA VGKINLSPAT LLSVFTGQAD ASLVFIVEQL RMPRLALAAL VGAALAVSGL ILQSIIRNPL ASPDLLGITS GASAAAVLYL SFFSAALGAQ FLPLAAISGA GLAALVIYLL AWNQGASPLR MVLIGVGVSA LLAAVTTFIL VFSPLTTTLS AYVWLTGSVY GASWPEPRAL AGWLLMTLPL LALLARQVRM QQLDDALAQG IGVRVQWLRA GLLLVSVALA GLAVAWGGAI AFVGLIAPHI AKRLMPPGFV GQALMAALIG ANLVMLADLA GRTLFLPLDL PAGIFVAVLG TPFFLYLLIN QRH
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