Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2588 |
Symbol | |
ID | 3368105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3034139 |
End bp | 3034915 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637652936 |
Product | HpcH/HpaI aldolase |
Protein accession | YP_235665 |
Protein GI | 66045824 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0901158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00712215 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGCTGA GGACCAATAC GCTCAAAAGC AGGATTGCCG ACGGACAGCC GGCACACGGG GTGATCAGTT CGATCCCGGC CCCGGCCGCC ATCGAGCTGA TCGCCGAGGC CGGGTTCGAC TTCGTGATCA TCGACATGGA ACACGTGCTG ATCAACCCGG AAACCGTGGA AAACATGATC CGCGTGGCAG AGAGCTACGA CCTCACACCA CTGGTGCGGG TCGCCGATCT CAACCCGAAA ACCCTGCTGC GCCTGCTCGA TGGCGGCGCG CAGGGCATCG TCTTGCCGAT GATCGAGAGC CCCGAGCAAC TGGCGGATGC GATTGCCGCC TGCAAGTACC ACCCGCTGGG TCGCCGCAGC CTCAATGCCG GCCGTCCCGG CTCGTTCGGC AAGCACAGCC TGGCGCAGTA CGTGGAGGCT GCCAATCAAC AGATCATGGT GGTGGCGATG ATCGAAAGCG CCGAAGGCGT GCGACGTGCC GCCGAGATCG CCAGCGTGCC GGGTCTGGAC ATGATTCTTG AAGGCGCGGC AGACCTGTCA CAGTCACTGG GCATGCCCTG GCAGATCGAT CAGCCAGATG TACAAAACGC GTTGCTTGCG ACCTGGCAAG CCGCCCACGC GGCGGGCGTC GCCTATTGCG CGATCCCCCG TCAACCCGGA GACGCTGCCC GCTGGCAGGC GCGCGGGGTC AACACCTTTG TCCTCGGGGA TGAGCGCGGC ATTGCCTTTC GCGCGCTTCA GGCCCGCCTG GCTCAACATT CAGCAGAAGG AAAATAA
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Protein sequence | MMLRTNTLKS RIADGQPAHG VISSIPAPAA IELIAEAGFD FVIIDMEHVL INPETVENMI RVAESYDLTP LVRVADLNPK TLLRLLDGGA QGIVLPMIES PEQLADAIAA CKYHPLGRRS LNAGRPGSFG KHSLAQYVEA ANQQIMVVAM IESAEGVRRA AEIASVPGLD MILEGAADLS QSLGMPWQID QPDVQNALLA TWQAAHAAGV AYCAIPRQPG DAARWQARGV NTFVLGDERG IAFRALQARL AQHSAEGK
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