Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2585 |
Symbol | |
ID | 3368102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3029650 |
End bp | 3030858 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652933 |
Product | Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 |
Protein accession | YP_235662 |
Protein GI | 66045821 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.126508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000677908 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCATAAGG TGCCGGAGAC CGTACTGGCG GCCATCAAGG AGGCTCGGGC GCTGGAAACC GACCCGCTGG CGGCCTTCTT CTACGATCTG GACGCGTTGC AGCAGCATGT CAGTGAAGTC ATGGCGGCGC TGCCCGCAGG TGTCGAGCTG TATTACGCGA TCAAGGCCAA CAGCGAAGCG CTGATGCTGG AAACCCTGGC CCCTCTGGTC AGTGGCTTTG AAATTTCCTC TGGGGGCGAG ATCGAGCGGG TGATGGCCTG TCCGACACGC AAGCCCTACG TGTTCTCGGG CCCAGGCAAA CTCGATTCCG ATCTGCGCTC GGCGTTGCTC AACAAGGTTG AAGCCATTCA CCTGGAGAGC CTCAACGAAA TCGCGCGTCT GCAACAGCTG GCAGAACAGG CGGGGCGCGT GCAGCCGGTG TTCCTGCGCA TCAATCCGCA ACTGCCCGCT GCACAGTCGA GCCGGCTGGC GATGGCCGGG ACCGCGACAC CGTTCGGCAT TGACGAAGCC GACCTGGCCG AGGCGGTCAG ACGCGTGGAC AACGCCAGCC ACCTGACGCT CAAGGGCTTT CACGTACATG CCATGTCGCA TCAGATGTCG GTTGAACGTC ATGAGCAGTT GCTCGATTTC TACCTGCAGC GCTGGCAGGA ATGGAAGGCT TTGGCCCGCG ACCCGAGCCA GCTCACCCAT TTCAACGTCG GCGGCGGTAT TGGCGTCGAT TACCTCAACA GCCAGCAGTT CGACTGGCAG CGGCTGTGCC GTTATCTGGA AAAACGCCTG GGCGAGCAGC ACGACGCGCC GATCCTGCGC TTTGAGCCGG GACGCTTCAT CAGCGCCTAT TGCGGCTATT ACGCCATCGA GGTGCTGGAC AGCAAAACCA GCCACGGCGA GCATTTTCTG GTCTGCCGAG GCGGAACTCA CCAGTTTCGC CTGCCGGTTG CGCAAAGCCA TGACCATCCG GTTATCCATC TGCCGAGTAC GCCGCAGCCA GCTGCCTCGT CAGAACAGGC TTATACCATT GTCGGCCAGC TATGCACGCC CAAGGACGTG CTGAGCCGTC GCCAGCCACT CAAGGGTGTG AACATTGGTG ACCTGCTGGT TCTGCCGCTG GCGGGAGCGT ATGGCTACAA CATTTCCCAT GCCGACTTTC TCTGTCATCC ACGACCGTCA CAGCACTTCG TGCGCAACGG CGAACGGGTT CGCCAATGA
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Protein sequence | MHKVPETVLA AIKEARALET DPLAAFFYDL DALQQHVSEV MAALPAGVEL YYAIKANSEA LMLETLAPLV SGFEISSGGE IERVMACPTR KPYVFSGPGK LDSDLRSALL NKVEAIHLES LNEIARLQQL AEQAGRVQPV FLRINPQLPA AQSSRLAMAG TATPFGIDEA DLAEAVRRVD NASHLTLKGF HVHAMSHQMS VERHEQLLDF YLQRWQEWKA LARDPSQLTH FNVGGGIGVD YLNSQQFDWQ RLCRYLEKRL GEQHDAPILR FEPGRFISAY CGYYAIEVLD SKTSHGEHFL VCRGGTHQFR LPVAQSHDHP VIHLPSTPQP AASSEQAYTI VGQLCTPKDV LSRRQPLKGV NIGDLLVLPL AGAYGYNISH ADFLCHPRPS QHFVRNGERV RQ
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