| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2568 |
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| Symbol | |
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| ID | 3368085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2981841 |
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| End bp | 2982596 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637652916 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_235645 |
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| Protein GI | 66045804 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.459864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAT TCTGGAACAA GGCGTTCGAT CTCAATGGCC GTTGTGCGGT CATCACCGGC
GGAGCAGCCG GGATTGGCCT TGCCTGTGCC AGCCTGCTGG TCGCGCGCGG CGCGCGGGTC
GCACTGCTGG ACCGTGACCC GGCAGTGGCC GAGGTTGCCG CCGGCCTGGG CAGCGGGCAC
CTCGGTATCG CGGTCGACCT GCGCCGGGTC GATCAGGTCA ACAGCACCAT CGACAGCGTC
TTCGAGCATT TCCAGCGCAT CGATTATCTG GTCAACAGTG CCGGGGTAGC CATGCTGGAC
AAGGCTGTCG ACGTCAGCGA AGAGGCCTGG GACACGACGC TGGACATCAA CCTCAAGGCC
AGTTTCTTCG TCGCCCAGGC CTGCGCGCGA CACATGCTCG GTCAAGGCAG CGGACGCATC
GTCAATCTTG CCTCTCAGGC GGCGGTCATT GGCCTGGACC GGCACGTCGC CTACTGCGCG
AGCAAGGCCG CAGTGGTCGG CATGACCAAA GTGCTGGCCA TGGAGTGGGC ACCACACATC
AACGTCAACG CCATCTCGCC CACCATCGTC GAGACCGCGC TGGGCAAAAA AGCCTGGGCG
GGCGAAGTCG GAGAACGGGC CAAAACGCAG ATCCCGGCAG GCCGCTTCGC CCAGCCGGAG
GAAATAGCCG GGCTGGCCCT GTACCTGCTC AGCGACGCCG CCAGCATGAT CACCGGCGAA
AACGTAGTGA TCGACGGCGG CTACAGCATC CAGTAA
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| Protein sequence | MSEFWNKAFD LNGRCAVITG GAAGIGLACA SLLVARGARV ALLDRDPAVA EVAAGLGSGH
LGIAVDLRRV DQVNSTIDSV FEHFQRIDYL VNSAGVAMLD KAVDVSEEAW DTTLDINLKA
SFFVAQACAR HMLGQGSGRI VNLASQAAVI GLDRHVAYCA SKAAVVGMTK VLAMEWAPHI
NVNAISPTIV ETALGKKAWA GEVGERAKTQ IPAGRFAQPE EIAGLALYLL SDAASMITGE
NVVIDGGYSI Q
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