| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2460 |
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| Symbol | |
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| ID | 3367977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2847916 |
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| End bp | 2848938 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637652808 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_235537 |
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| Protein GI | 66045696 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0165849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0077968 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGATTTCG TTGTCGATTA CGCAAGTTTT CTGGCCAAGA CCGTGACGCT GGTGATCGCC
ATCGTTGTGG TACTGGTTGC CATTGCGTCC ATGCGTGGCA AGGGCCGTCG CAAGTCGTCC
GGACAATTGC AGGTCACCCG GCTCAATGAT TTCTATAAGG GCCTGCGCGA ACGGCTTGAG
CAGTCATTGC TCGACAAGGA GCACCTCAAG ACGCTGCGCA AAGAGCAGGG CAAGGCACTG
AAGAAAGAGA AAAAGCACGC CGAGCCCAAG GCTCGTGTCT ACGTGCTGGA TTTCGACGGG
GACATCAAGG CCTCGGCCAC TGAAAGCATG CGCCATGAAA TCACCGCGCT GCTGACCCTG
GCCACCGACA AGGATGAAGT GGTGCTGCGT CTGGAAAGCG GCGGCGGCAT GGTTCACAGC
TACGGCCTGG CGTCTTCGCA ACTGGCGCGT ATTCGTCAGG CGGGTATCCC GCTGACCGTA
TGCATCGACA AGGTCGCTGC CAGTGGTGGT TACATGATGG CGTGCATCGG CAACAAGATC
ATCAGCGCAC CGTTCGCCAT CCTCGGATCC ATTGGCGTGG TGGCACAGCT GCCCAACGTC
AATCGCCTGT TGAAAAAGCA CGACATCGAT TTCGAAGTGC TGACCGCAGG TGAATACAAG
CGCACCCTGA CCGTGTTTGG CGAAAACACC GAAAAGGGCC GCGAGAAATT CCAGCAGGAC
CTGGACATCA CTCACGACCT GTTCAAGAAC TTCGTTGCCA GCTACCGCCC GCAATTGTCC
ATCGACGAAG TGGCGACGGG TGAGGTATGG CTGGGCATGG CGGCGGTCGA CAAGCTGCTG
GTCGATGAAC TCAAGACCAG TGACGAGTAC CTGGCCGAGC GGGCCAGGAA TGCAGACGTG
TTCCACCTGC ACTACGTGCA GCGCAAGAGC CTGCAAGAGC GCATGGGCAT GGCGGCTGCC
ACCTCAGCGG ATCAACTGGC CACCAAGTGG TGGGGACGTT TGACCCAGCA GCGGTTCTGG
TAG
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| Protein sequence | MDFVVDYASF LAKTVTLVIA IVVVLVAIAS MRGKGRRKSS GQLQVTRLND FYKGLRERLE
QSLLDKEHLK TLRKEQGKAL KKEKKHAEPK ARVYVLDFDG DIKASATESM RHEITALLTL
ATDKDEVVLR LESGGGMVHS YGLASSQLAR IRQAGIPLTV CIDKVAASGG YMMACIGNKI
ISAPFAILGS IGVVAQLPNV NRLLKKHDID FEVLTAGEYK RTLTVFGENT EKGREKFQQD
LDITHDLFKN FVASYRPQLS IDEVATGEVW LGMAAVDKLL VDELKTSDEY LAERARNADV
FHLHYVQRKS LQERMGMAAA TSADQLATKW WGRLTQQRFW
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