| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2456 |
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| Symbol | |
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| ID | 3367973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2844551 |
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| End bp | 2845318 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652804 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_235533 |
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| Protein GI | 66045692 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00716886 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCAGAA CCCAGCTATT CGACCTTGAT GGCAAGGTTG CATTCGTTTC AGGTGCCAGC
CGAGGCATCG GTGAAGCCAT TGCTCGGCTG CTGGCCCAGC AAGGCGCGCA CGTTATCGTC
TCGAGTCGCC GGCTCGAGGG TTGCCAGGCA GTGGCGGACG CCATCGTCAG CGAGGGTGGC
AAGGCAACAG CCATTGCCTG CCACATCGGT GAGCTGGAAC AGATAAACAG TGCATTCGCG
CAGATTCGCC AACAGTTCGG GCGCCTGGAT GTCCTGGTCA ACAACGCCGC CACCAACCCG
CAGTTCTGCA ACGTGCTGGA CACCGATCCC GGCGCCTTCC AGAAGACAGT CGACGTCAAC
ATTCGCGGTT ACTTTTTCAT GTCCGTGGAA GCCGGCAAGC TGATGCGCGA AAACGGTGGC
GGCAGCATCA TCAACGTGGC GTCCATCAAC GCGGTATCGC CGGGTGCCTA TCAAGGCGTC
TATTCGATGA CCAAGGCAGC CGTGGTCAAC ATGACCAAGG TGTTTGCCAA GGAGTGCGCT
GAATTCGGTA TTCGCTGCAA CGCCCTGCTT CCCGGCTTGA CTGACACCAG GTTCGCATCC
GCATTGGTCA AGAACGACGC AATCCTCAAT GTGGCGCTGT CCCAGATCCC GCTGAAACGC
GTGGCCGCTC CCAGCGAGAT GGCCGGCGCG GTGCTTTACC TGGCCAGTGA AGCCTCCAGC
TATACCACCG GTGTGGCGCT GAACGTCGAC GGGGGCTTTT TATCCTGA
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| Protein sequence | MSRTQLFDLD GKVAFVSGAS RGIGEAIARL LAQQGAHVIV SSRRLEGCQA VADAIVSEGG
KATAIACHIG ELEQINSAFA QIRQQFGRLD VLVNNAATNP QFCNVLDTDP GAFQKTVDVN
IRGYFFMSVE AGKLMRENGG GSIINVASIN AVSPGAYQGV YSMTKAAVVN MTKVFAKECA
EFGIRCNALL PGLTDTRFAS ALVKNDAILN VALSQIPLKR VAAPSEMAGA VLYLASEASS
YTTGVALNVD GGFLS
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