Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2427 |
Symbol | |
ID | 3367942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2807649 |
End bp | 2808932 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652773 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_235504 |
Protein GI | 66045663 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.214399 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACA CGCCCTACCC GCAGTCCTAT TACGCGGCTT CAGCCAATGC TGCCCCGGAA CGTCCCGTGC TGCAGGGCGA AGTCGAAACT GACGTGTGTG TCATCGGAGC CGGTTACACA GGCTTGTCCA GTGCTCTGTT TCTGCTGGAA AACGGATTTC GGGTCACGGT GCTGGAAGCG GCGAAAGTCG GCTTCGGCGC ATCGGGGCGT AATGGCGGGC AGATCGTCAA CAGCTACAGC CGCGACATCG ATGTCATCGA GCGAACCGTG GGGCCACGCC AGGCGCAATT GCTCGGGCAG ATGGCCTTCG AAGGCGCATC GATCATTCGG GATCGGGTTT CCCGTTACGG CATTCAGTGC GACCTGAAAG ATGGCGGTGT ATTCGCAGCG CTGACCAGCA AGCAGCTGGC GCATCTCGAG GCCCAGCAGC GGCTCTGGGA GCGCTACGGG CATACCGGCC TCGAGCTGAT GGACAAGCGC CGGATCAATG AAGTTGTGGC CTGTGATCAG TACATCGGCG GGTTGCTGGA CATGACCGGT GGGCATATTC ATCCACTCAA CCTGGCGCTG GGTGAAGCCG CCGCTGTCGA GACGCTGGGT GGCACCCTCT ATGAGCAATC AGCGGCCATT CGTATCGAGC GCGGGGCAAA TCCTGTGGTG CATACGGCGC AAGGCAGGGT CCGGGCCAAG TTCATTATCG TGGCCGGCAA TGCCTACCTG GGCAATCTGG TCCCGGAGCT GGCGGCCAAG TCGATGCCAT GTGGCACTCA GGTCATCACC ACCGAGCCGT TGAGCGATGA ACTGGCCAAG ACACTTCTGC CGCAGGACTA CTGCGTCGAA GACTGTAATT ACCTGCTGGA TTACTACCGT CTCAGCGCCG ACAAGCGCCT GATCTTCGGC GGCGGCGTGG TGTACGGTGC CAGAGACCCC GCCAATATCG AAGCCATCAT CCGGCCAAAA ATGCTCAAGG CGTTTCCGCA GCTCAAGAAC GTAAAGATCG ACTACGCATG GACCGGCAAC TTCCTGCTGA CCCTGTCTCG TCTGCCCCAG GTTGGACGAC TGGGCGACAA CATCTATTAC TCGCAGGGCT GCAGCGGACA CGGTGTGACC TACACCCACC TGGCCGGCAA AGTACTGGCC GAGGCGCTGC GCGGTCAGGC AGAGCGCTTC GATGCGTTCG CCGACCTGCC CCACTACCCG TTCCCCGGCG GACAGGTGCT GCGCACCCCG CTGACTGCGC TGGGCGCCTG GTATTACAGC CTGCGTGACC GACTCGGTTT CTAG
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Protein sequence | MANTPYPQSY YAASANAAPE RPVLQGEVET DVCVIGAGYT GLSSALFLLE NGFRVTVLEA AKVGFGASGR NGGQIVNSYS RDIDVIERTV GPRQAQLLGQ MAFEGASIIR DRVSRYGIQC DLKDGGVFAA LTSKQLAHLE AQQRLWERYG HTGLELMDKR RINEVVACDQ YIGGLLDMTG GHIHPLNLAL GEAAAVETLG GTLYEQSAAI RIERGANPVV HTAQGRVRAK FIIVAGNAYL GNLVPELAAK SMPCGTQVIT TEPLSDELAK TLLPQDYCVE DCNYLLDYYR LSADKRLIFG GGVVYGARDP ANIEAIIRPK MLKAFPQLKN VKIDYAWTGN FLLTLSRLPQ VGRLGDNIYY SQGCSGHGVT YTHLAGKVLA EALRGQAERF DAFADLPHYP FPGGQVLRTP LTALGAWYYS LRDRLGF
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