Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2361 |
Symbol | |
ID | 3367876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2737422 |
End bp | 2739785 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652707 |
Product | DNA polymerase II |
Protein accession | YP_235438 |
Protein GI | 66045597 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.168731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.46504 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATGTAC AGCAGGGCTT TATCCTGAGT CGGCACTGGC AAGACACGCC CGCCGGGACC GAGGTCGACT TCTGGTTGGC CACCGATCAG GGCCCGCGCC ATATTCGCCT GCCTTGCCAG CCCTCTGTCG CCTTTATTCC TGCCGAACAG GGTGAGCGGG CCCGATCGTT GTTGCGTACC GAACGTGGCG TAGAACTGCG TCCGCTTGAG CTCTGTGATT TTCGTCACCG TCCGGTGCTG GGTGTGTATT GCCAGCAGCA CCGCCAGTTG ATGAACATCG AAAAGTTGCT GCGCAGAGGC AATGTAGACG TCTATGAAGC GGACATTCGC CCGCCGGAAC GCTACCTGAT GGAACGCTTC ATCACCGCGC CGGTGCAGTT TGGCGGCACG CCGGATGCCG ATGGGGTGCT GTGCGACGCG CAGATCAGAC CATCGCCCGA TTACCGTCCT AATCTGAGGC TGGTCTCGCT GGATATCGAA ACCACCGCCC GCGGCGAGTT GTATTCGATT GCACTGGAGG GCTGTGGGCA GCGCCAGGTC TACATGCTGG GGCCGGCCAA CGGTGGTGAC GAGACGCTGG ATTTTCAGCT CGATTATTGC GATACCCGCG CGCAGTTGCT CGAACGCCTG AACGACTGGC TGGCGCTGCA CGACCCTGAT GCGATTATCG GCTGGAACGT TATCCAGTTC GATTTACGCG TGCTGCATGA GCATGCCCAG CGCCTGCAAG TGCCGTTAAG GCTTGGGCGT GGCGGTGAAG CGATGGGCTG GCGTGAGCAT GGCAGTCGCA ACAACCATTT TTTTGCCGAA GTGAGCGGGC GGCTGATCAT CGACGGAATC GAGGCATTGC GCTCGGCGAC CTGGAGCTTT CCGTCGTTCA GCCTCGAATA CGTCGCGCAG ACTCTGCTGG GCGAAGGCAA GGCCATCGAC ACGCCTTATC AGCGTATGGA CGAAATCAAC CGCATGTTCG CCGAGGACAA ACCGGCGCTG GCGCGTTACA ACATCAAGGA CTGCGAACTG GTCTCGCGCA TCTTTGCCAA GACCCAATTG CTGACCTTTC TGCTCGAGCG CGCCACGGTC ACCGGTCTGC CTGCCGACCG CAGCGGCGGT TCGGTCGCGG CTTTCTGCCA TTTGTATATC CCGTTGATGC ACCGCCAGGG TTTCGTGGCG CCCAACCTGG GCGAGCGCCT GCCAGAGGCC AGCCCTGGCG GTTTTGTCAT GGATTCCCAG CCAGGGCTGT ATGAGTCGGT GCTGGTACTG GACTACAAGA GCCTTTATCC GTCGATCATT CGTACCTTTC TGATTGATCC GGTGGGCTTG ATCGAAGGCC TGCGCCATCC AGCGGACAGC GAGTCGGTGC CGGGCTTTCG CGGCGCGCGC TTCTCGCGCA CCCGTCACAG CCTGCCAGCC ATCGTCGAGC GCGTGTGGCA AGGTCGGGAA GCGGCCAAGC GCGAGCAGAA CGCCCCCTTG TCCCAGGCGC TGAAAATCAT CATGAATGCC TTCTACGGCG TGTTGGGCTC GAGCGGCTGT CGCTTTTTCG ATCCGCGCCT GGCTTCATCG ATCACCCTGC GCGGGCATGA AATCATGCTC AAGACCCGCG ACCTCATTCA GGCGCAGGGC TACACCGTGA TCTATGGCGA TACCGACTCG ACCTTTGTCT GGCTGGGCCG TCCTCACGGC CAGGAAGAGG CGGCAAGCAT CGGCAAGGCG CTGGTGCAGC AGGTCAACCA GTGGTGGCGT GAGCACTTGC ACACCGAGTA CGGTCTGCAC AGCGCCCTTG AACTGCAATA CGAAACGCAT TTTCGGCGCT TCCTGATGCC CACCGTGCGC GGTGCGGAGG AGGGCAGCAA GAAGCGTTAC GCCGGCCTGG TGACCCGTGC TGACGGTTCC GAAGAGATGG TCTACAAGGG CCTCGAAACG GTACGCACCG ACTGGTCGCC ACTGGCTCAG CAGTTTCAGC AGGAGCTTTA CCTGCGGATC TTCAAGCGTC AGCCGTATCA GGATTACGTG CGTGACTACG TGCAACGCAC CCTGTCAGGC GAGCTGGATG ATCTGTTGAT TTACCGCAAG CGCTTGCGTC GCAAGCTCGA TGACTACCAG CGTAATGTGC CGCCCCATGT ACGCGCCGCG CGGCTGGCCG ATGAATACAA CGACCAGCAG GGGCGACCGC GTCAGTACCA GAGTGGCGGC TGGATCAGCT ACGTGATGAC CACCGCCGGG CCGGAACCGC TGGAGATTCG TCACGCCCCG ATTGACTACG ATCACTACGT GACTCGTCAG TTACAACCGC TGGCTGACGC GATCCTGCCG TTTGTGGACG ACGATTTCAG CACCCTGATC GGCGGGCAAC TGGGGTTGTT CTAA
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Protein sequence | MDVQQGFILS RHWQDTPAGT EVDFWLATDQ GPRHIRLPCQ PSVAFIPAEQ GERARSLLRT ERGVELRPLE LCDFRHRPVL GVYCQQHRQL MNIEKLLRRG NVDVYEADIR PPERYLMERF ITAPVQFGGT PDADGVLCDA QIRPSPDYRP NLRLVSLDIE TTARGELYSI ALEGCGQRQV YMLGPANGGD ETLDFQLDYC DTRAQLLERL NDWLALHDPD AIIGWNVIQF DLRVLHEHAQ RLQVPLRLGR GGEAMGWREH GSRNNHFFAE VSGRLIIDGI EALRSATWSF PSFSLEYVAQ TLLGEGKAID TPYQRMDEIN RMFAEDKPAL ARYNIKDCEL VSRIFAKTQL LTFLLERATV TGLPADRSGG SVAAFCHLYI PLMHRQGFVA PNLGERLPEA SPGGFVMDSQ PGLYESVLVL DYKSLYPSII RTFLIDPVGL IEGLRHPADS ESVPGFRGAR FSRTRHSLPA IVERVWQGRE AAKREQNAPL SQALKIIMNA FYGVLGSSGC RFFDPRLASS ITLRGHEIML KTRDLIQAQG YTVIYGDTDS TFVWLGRPHG QEEAASIGKA LVQQVNQWWR EHLHTEYGLH SALELQYETH FRRFLMPTVR GAEEGSKKRY AGLVTRADGS EEMVYKGLET VRTDWSPLAQ QFQQELYLRI FKRQPYQDYV RDYVQRTLSG ELDDLLIYRK RLRRKLDDYQ RNVPPHVRAA RLADEYNDQQ GRPRQYQSGG WISYVMTTAG PEPLEIRHAP IDYDHYVTRQ LQPLADAILP FVDDDFSTLI GGQLGLF
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