Gene Psyr_2361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2361 
Symbol 
ID3367876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2737422 
End bp2739785 
Gene Length2364 bp 
Protein Length787 aa 
Translation table11 
GC content61% 
IMG OID637652707 
ProductDNA polymerase II 
Protein accessionYP_235438 
Protein GI66045597 
COG category[L] Replication, recombination and repair 
COG ID[COG0417] DNA polymerase elongation subunit (family B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.168731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.46504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATGTAC AGCAGGGCTT TATCCTGAGT CGGCACTGGC AAGACACGCC CGCCGGGACC 
GAGGTCGACT TCTGGTTGGC CACCGATCAG GGCCCGCGCC ATATTCGCCT GCCTTGCCAG
CCCTCTGTCG CCTTTATTCC TGCCGAACAG GGTGAGCGGG CCCGATCGTT GTTGCGTACC
GAACGTGGCG TAGAACTGCG TCCGCTTGAG CTCTGTGATT TTCGTCACCG TCCGGTGCTG
GGTGTGTATT GCCAGCAGCA CCGCCAGTTG ATGAACATCG AAAAGTTGCT GCGCAGAGGC
AATGTAGACG TCTATGAAGC GGACATTCGC CCGCCGGAAC GCTACCTGAT GGAACGCTTC
ATCACCGCGC CGGTGCAGTT TGGCGGCACG CCGGATGCCG ATGGGGTGCT GTGCGACGCG
CAGATCAGAC CATCGCCCGA TTACCGTCCT AATCTGAGGC TGGTCTCGCT GGATATCGAA
ACCACCGCCC GCGGCGAGTT GTATTCGATT GCACTGGAGG GCTGTGGGCA GCGCCAGGTC
TACATGCTGG GGCCGGCCAA CGGTGGTGAC GAGACGCTGG ATTTTCAGCT CGATTATTGC
GATACCCGCG CGCAGTTGCT CGAACGCCTG AACGACTGGC TGGCGCTGCA CGACCCTGAT
GCGATTATCG GCTGGAACGT TATCCAGTTC GATTTACGCG TGCTGCATGA GCATGCCCAG
CGCCTGCAAG TGCCGTTAAG GCTTGGGCGT GGCGGTGAAG CGATGGGCTG GCGTGAGCAT
GGCAGTCGCA ACAACCATTT TTTTGCCGAA GTGAGCGGGC GGCTGATCAT CGACGGAATC
GAGGCATTGC GCTCGGCGAC CTGGAGCTTT CCGTCGTTCA GCCTCGAATA CGTCGCGCAG
ACTCTGCTGG GCGAAGGCAA GGCCATCGAC ACGCCTTATC AGCGTATGGA CGAAATCAAC
CGCATGTTCG CCGAGGACAA ACCGGCGCTG GCGCGTTACA ACATCAAGGA CTGCGAACTG
GTCTCGCGCA TCTTTGCCAA GACCCAATTG CTGACCTTTC TGCTCGAGCG CGCCACGGTC
ACCGGTCTGC CTGCCGACCG CAGCGGCGGT TCGGTCGCGG CTTTCTGCCA TTTGTATATC
CCGTTGATGC ACCGCCAGGG TTTCGTGGCG CCCAACCTGG GCGAGCGCCT GCCAGAGGCC
AGCCCTGGCG GTTTTGTCAT GGATTCCCAG CCAGGGCTGT ATGAGTCGGT GCTGGTACTG
GACTACAAGA GCCTTTATCC GTCGATCATT CGTACCTTTC TGATTGATCC GGTGGGCTTG
ATCGAAGGCC TGCGCCATCC AGCGGACAGC GAGTCGGTGC CGGGCTTTCG CGGCGCGCGC
TTCTCGCGCA CCCGTCACAG CCTGCCAGCC ATCGTCGAGC GCGTGTGGCA AGGTCGGGAA
GCGGCCAAGC GCGAGCAGAA CGCCCCCTTG TCCCAGGCGC TGAAAATCAT CATGAATGCC
TTCTACGGCG TGTTGGGCTC GAGCGGCTGT CGCTTTTTCG ATCCGCGCCT GGCTTCATCG
ATCACCCTGC GCGGGCATGA AATCATGCTC AAGACCCGCG ACCTCATTCA GGCGCAGGGC
TACACCGTGA TCTATGGCGA TACCGACTCG ACCTTTGTCT GGCTGGGCCG TCCTCACGGC
CAGGAAGAGG CGGCAAGCAT CGGCAAGGCG CTGGTGCAGC AGGTCAACCA GTGGTGGCGT
GAGCACTTGC ACACCGAGTA CGGTCTGCAC AGCGCCCTTG AACTGCAATA CGAAACGCAT
TTTCGGCGCT TCCTGATGCC CACCGTGCGC GGTGCGGAGG AGGGCAGCAA GAAGCGTTAC
GCCGGCCTGG TGACCCGTGC TGACGGTTCC GAAGAGATGG TCTACAAGGG CCTCGAAACG
GTACGCACCG ACTGGTCGCC ACTGGCTCAG CAGTTTCAGC AGGAGCTTTA CCTGCGGATC
TTCAAGCGTC AGCCGTATCA GGATTACGTG CGTGACTACG TGCAACGCAC CCTGTCAGGC
GAGCTGGATG ATCTGTTGAT TTACCGCAAG CGCTTGCGTC GCAAGCTCGA TGACTACCAG
CGTAATGTGC CGCCCCATGT ACGCGCCGCG CGGCTGGCCG ATGAATACAA CGACCAGCAG
GGGCGACCGC GTCAGTACCA GAGTGGCGGC TGGATCAGCT ACGTGATGAC CACCGCCGGG
CCGGAACCGC TGGAGATTCG TCACGCCCCG ATTGACTACG ATCACTACGT GACTCGTCAG
TTACAACCGC TGGCTGACGC GATCCTGCCG TTTGTGGACG ACGATTTCAG CACCCTGATC
GGCGGGCAAC TGGGGTTGTT CTAA
 
Protein sequence
MDVQQGFILS RHWQDTPAGT EVDFWLATDQ GPRHIRLPCQ PSVAFIPAEQ GERARSLLRT 
ERGVELRPLE LCDFRHRPVL GVYCQQHRQL MNIEKLLRRG NVDVYEADIR PPERYLMERF
ITAPVQFGGT PDADGVLCDA QIRPSPDYRP NLRLVSLDIE TTARGELYSI ALEGCGQRQV
YMLGPANGGD ETLDFQLDYC DTRAQLLERL NDWLALHDPD AIIGWNVIQF DLRVLHEHAQ
RLQVPLRLGR GGEAMGWREH GSRNNHFFAE VSGRLIIDGI EALRSATWSF PSFSLEYVAQ
TLLGEGKAID TPYQRMDEIN RMFAEDKPAL ARYNIKDCEL VSRIFAKTQL LTFLLERATV
TGLPADRSGG SVAAFCHLYI PLMHRQGFVA PNLGERLPEA SPGGFVMDSQ PGLYESVLVL
DYKSLYPSII RTFLIDPVGL IEGLRHPADS ESVPGFRGAR FSRTRHSLPA IVERVWQGRE
AAKREQNAPL SQALKIIMNA FYGVLGSSGC RFFDPRLASS ITLRGHEIML KTRDLIQAQG
YTVIYGDTDS TFVWLGRPHG QEEAASIGKA LVQQVNQWWR EHLHTEYGLH SALELQYETH
FRRFLMPTVR GAEEGSKKRY AGLVTRADGS EEMVYKGLET VRTDWSPLAQ QFQQELYLRI
FKRQPYQDYV RDYVQRTLSG ELDDLLIYRK RLRRKLDDYQ RNVPPHVRAA RLADEYNDQQ
GRPRQYQSGG WISYVMTTAG PEPLEIRHAP IDYDHYVTRQ LQPLADAILP FVDDDFSTLI
GGQLGLF