Gene Psyr_2295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2295 
Symbol 
ID3367810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2666274 
End bp2668085 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content63% 
IMG OID637652645 
ProductABC transporter, transmembrane region:ABC transporter 
Protein accessionYP_235376 
Protein GI66045535 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.65139e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCGGTTT TCAAACGTTT CATTTCGTTC ATGCAGCAGG CCTTGCGCGC CATGCATCTG 
GTCTGGACCA CCTCCCGAGC GCTGTCCATC GGCCTGATCG TCGCCACGCT GATCGCCGGC
CTGCTGCCCG CGCTGGCCGC CTGGCTCGGC CAGCGCATCG TCGATGCCGT GGTCGCTGCC
ATGCAGTTGC ACGCCAGCGC AGGCGAAGCG CCGTTGTGGC CGGTGTTGCG ATATGTGTTG
TTCGAAGCCG GTGTGCTGGC TCTGCTGGCG GCAGCACAGC GTGGGCTTTC GGTGCAGCAG
GCGTTGCTGC GGGTGCTGCT GGGGCAGAAG GTCAATACCC TGATTCTGGA GAAGGCCCAG
ACCCTGTCGC TGTCGCAGTT CGAAGACTCC GAGTTCTACG ACAAACTCGT GCGGGTCCGG
CGTGAAGCCT CGACACGGCC GCTGGCGCTG GTGACCAAAT CGTTGGGGTT GCTGCAAAAC
CTTATTTCGC TGATCAGCTT TGCCGTACTG CTGGTGCATT TTTCGCCTTG GGCGTTGCTG
ATTCTGGTGC TCGGCGCGTT GCCGGTGTTC TTTGCCGAGG CGCATTTTTC CGGCGACGCG
TTCCGCCTGT TTACCCGGCG TGCACCAGAG ACCCGTCGGC AGAATTACAT CGAAACACTG
CTCTCCCACG AGGGTTACAT CAAGGAGGTC AAGCTGTTCG GCTTCGCGCC GCTGCTGCTC
AAGCGTTACC GCGACACCTT CGAGCGTCTG TACGCCGAAG ACCGGCGCCT TACGGTGCGC
CGTGATGGTT GGGGCTTCCT GCTCGGCCTG CTCGGCACGG CTGCGTTTTA CCTGGCCTAC
GCCTGGGTGG TGGTCGATGC GGTGCATGGG CGGATCACCC TGGGGCAGAT GACCATGTAC
CTGGTGCTGT TCAAGCAGGG GCAGGCCGCG GTCAGCAGCA GTCTCAGCGC CATCAGTGGT
CTGTACGAGG ACGGCCTGTA TCTGGCCGAC CTGTATGTCT ACCTCGGTCA GCCGGTCACG
CCGTCTGCCG GCAGCCTGAC CGTGGGCGCG CAGCCCGGCG ATGGCATGCG CTTCGAAAAC
GTCAGTTTCA CCTACCCGGG GACCAGCCGT CCGGCACTGG AAAACATCGA TCTGCACCTG
GCGCCGGGGC GCAGCGTGGC CCTGGTGGGC GAGAACGGCT CGGGGAAAAC CACGCTGATC
AAGCTGCTGA CGCGTCTTTA CCAGCCTGAT CAAGGCCGCA TTCTGCTGGA CGGCAGCGAC
CTGCAGGAGT GGGACGAAGA GGCTTTGCGA TCGCGCATCG GCGTGATTTT TCAGGACTTC
ATTCGCTATC AGTTTCTGGT CGGCGAGAAC CTCGGAGTCG GCGACACTCA GGCCTTCCAT
GATGAAGGCC GTTGGCGCGA AGCGGCGGCG CAGGGCATGG CCGCGCAGTT CATCGAACAG
CTCGACAATG GCTACGCCAC CCAATTGGGT CGCTGGTTTG CGGGAGGTCA GGAACTGTCC
GGCGGGCAGT GGCAGAAAAT CGCGCTGTCA CGCGCCTACA TGCGCCGCGA CGCCGATATT
CTGATTCTCG ACGAGCCGAC TGCTGCGCTG GATGCAGGCG CAGAAGCGGC GGTATTCGAG
CATTTTCGCG AGTATGCCAA AGGGCGCATG ACGCTGCTCA TATCGCATCG CTTTTCCAGC
GTGCGCAATG CCGAACACAT CGTGGTACTG GAGCACGGGC GGGTGCTGGA ACGCGGTGAT
CATGACAGCC TGATCGCCGC CGCAGGGCGC TACGCCGCGC TGTTCGATCT GCAGGCGCAG
GGTTATCGCT AG
 
Protein sequence
MPVFKRFISF MQQALRAMHL VWTTSRALSI GLIVATLIAG LLPALAAWLG QRIVDAVVAA 
MQLHASAGEA PLWPVLRYVL FEAGVLALLA AAQRGLSVQQ ALLRVLLGQK VNTLILEKAQ
TLSLSQFEDS EFYDKLVRVR REASTRPLAL VTKSLGLLQN LISLISFAVL LVHFSPWALL
ILVLGALPVF FAEAHFSGDA FRLFTRRAPE TRRQNYIETL LSHEGYIKEV KLFGFAPLLL
KRYRDTFERL YAEDRRLTVR RDGWGFLLGL LGTAAFYLAY AWVVVDAVHG RITLGQMTMY
LVLFKQGQAA VSSSLSAISG LYEDGLYLAD LYVYLGQPVT PSAGSLTVGA QPGDGMRFEN
VSFTYPGTSR PALENIDLHL APGRSVALVG ENGSGKTTLI KLLTRLYQPD QGRILLDGSD
LQEWDEEALR SRIGVIFQDF IRYQFLVGEN LGVGDTQAFH DEGRWREAAA QGMAAQFIEQ
LDNGYATQLG RWFAGGQELS GGQWQKIALS RAYMRRDADI LILDEPTAAL DAGAEAAVFE
HFREYAKGRM TLLISHRFSS VRNAEHIVVL EHGRVLERGD HDSLIAAAGR YAALFDLQAQ
GYR