Gene Psyr_2291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2291 
Symbol 
ID3367806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2662800 
End bp2663615 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content61% 
IMG OID637652641 
Productaldolase II superfamily protein 
Protein accessionYP_235372 
Protein GI66045531 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.318887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.07771e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCAACG TCAGCGCTTT GCCAGTCCAG TCAGGTACGA CGCAGTCGGG TGGCGGCAGC 
GTGCGCGACA GAGTGTCGCC GGAGGAATGG GACGTCCGGG TCAAACTGGC GGCAGCCTAT
CGGCTGGCGG CGCTCAAGCG TTGGACCGAT CATATCTATA CGCACTTTTC GGCACGTGTG
CCGGGCCCGG ACGAGCACTT TCTGATCAAC GCGTTCGGGC TGTTGTTTGA TGAAATCACC
GCGTCCAACC TGGTCAAGGT CGATATTGAC GGGACGATTG TCGATGACCC CACCGGGCTG
GGTATCAACT ACGCCGGTTA CGTGATTCAC AGCGCCATTC ATGCAGCGCG CCACGACCTG
CAGGCGGTGC TGCACACTCA CACCCGTGAC GGTATCGCCG TGTCGGCCCA GAAGGACGGC
CTGCTGCCCA TCTCCCAGCA CTCGATTGCC TTCTCCGGCC GGGTGGCTTA CCACGGCTAT
GAAGGTATTG CGCTGGACTT GAGCGAACGC GAACGGCTGG TAGCGGACCT GGGTGACAAG
AGCGTGATGA TCCTGCGTAA CCACGGGTTG CTGACTGGCG GGGTGAGTGT CGAGCATGCG
TTTCAGCAGC TTCATGCCCT CGAGTACGCC TGCAACATTC AGATTGCAGC GCAGTCGGCG
GGTAACGCCG AACTGGTGTT TCCGCCGCGC GAGGTGATTG CCAAGGTGGA GCAGCAGGCA
AAGGCCATCA AGGACGGCCA TGCGCCGGGT GTCGCACGGC ACTGGAATGC CCTGATTCGC
GAGCTGGAGC GTAATGACAC CGACTACAGG ACCTGA
 
Protein sequence
MSNVSALPVQ SGTTQSGGGS VRDRVSPEEW DVRVKLAAAY RLAALKRWTD HIYTHFSARV 
PGPDEHFLIN AFGLLFDEIT ASNLVKVDID GTIVDDPTGL GINYAGYVIH SAIHAARHDL
QAVLHTHTRD GIAVSAQKDG LLPISQHSIA FSGRVAYHGY EGIALDLSER ERLVADLGDK
SVMILRNHGL LTGGVSVEHA FQQLHALEYA CNIQIAAQSA GNAELVFPPR EVIAKVEQQA
KAIKDGHAPG VARHWNALIR ELERNDTDYR T