Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2291 |
Symbol | |
ID | 3367806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2662800 |
End bp | 2663615 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652641 |
Product | aldolase II superfamily protein |
Protein accession | YP_235372 |
Protein GI | 66045531 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.318887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000307771 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCAACG TCAGCGCTTT GCCAGTCCAG TCAGGTACGA CGCAGTCGGG TGGCGGCAGC GTGCGCGACA GAGTGTCGCC GGAGGAATGG GACGTCCGGG TCAAACTGGC GGCAGCCTAT CGGCTGGCGG CGCTCAAGCG TTGGACCGAT CATATCTATA CGCACTTTTC GGCACGTGTG CCGGGCCCGG ACGAGCACTT TCTGATCAAC GCGTTCGGGC TGTTGTTTGA TGAAATCACC GCGTCCAACC TGGTCAAGGT CGATATTGAC GGGACGATTG TCGATGACCC CACCGGGCTG GGTATCAACT ACGCCGGTTA CGTGATTCAC AGCGCCATTC ATGCAGCGCG CCACGACCTG CAGGCGGTGC TGCACACTCA CACCCGTGAC GGTATCGCCG TGTCGGCCCA GAAGGACGGC CTGCTGCCCA TCTCCCAGCA CTCGATTGCC TTCTCCGGCC GGGTGGCTTA CCACGGCTAT GAAGGTATTG CGCTGGACTT GAGCGAACGC GAACGGCTGG TAGCGGACCT GGGTGACAAG AGCGTGATGA TCCTGCGTAA CCACGGGTTG CTGACTGGCG GGGTGAGTGT CGAGCATGCG TTTCAGCAGC TTCATGCCCT CGAGTACGCC TGCAACATTC AGATTGCAGC GCAGTCGGCG GGTAACGCCG AACTGGTGTT TCCGCCGCGC GAGGTGATTG CCAAGGTGGA GCAGCAGGCA AAGGCCATCA AGGACGGCCA TGCGCCGGGT GTCGCACGGC ACTGGAATGC CCTGATTCGC GAGCTGGAGC GTAATGACAC CGACTACAGG ACCTGA
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Protein sequence | MSNVSALPVQ SGTTQSGGGS VRDRVSPEEW DVRVKLAAAY RLAALKRWTD HIYTHFSARV PGPDEHFLIN AFGLLFDEIT ASNLVKVDID GTIVDDPTGL GINYAGYVIH SAIHAARHDL QAVLHTHTRD GIAVSAQKDG LLPISQHSIA FSGRVAYHGY EGIALDLSER ERLVADLGDK SVMILRNHGL LTGGVSVEHA FQQLHALEYA CNIQIAAQSA GNAELVFPPR EVIAKVEQQA KAIKDGHAPG VARHWNALIR ELERNDTDYR T
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