Gene Psyr_2290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2290 
Symbol 
ID3367805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2659700 
End bp2662102 
Gene Length2403 bp 
Protein Length800 aa 
Translation table11 
GC content59% 
IMG OID637652640 
ProductTonB-dependent receptor:TonB-dependent receptor 
Protein accessionYP_235371 
Protein GI66045530 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4771] Outer membrane receptor for ferrienterochelin and colicins 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.69019e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGGAATT TCAAACGCAG TGTATTGGCC ACGGCGATTT TTTCAGCCAA TTTGCTGAGC 
GTCGCGGGCA TCAGTGCAAG TGCATTCGCC GCAGAAGCGA CAGATGAAGC AAACACTCAG
GGTGCGTCCA CCCTGGGTAC AGTGATCGTG ACCGGCACCC GTGCGCAGGA GCGTACCGCC
AGCGCCTCGC TGTCGCCTAT CGATGTGATT TCCGGTGACA GCCTGCGCAG TTCCGGCTCC
AGCGAACTGG GCACCGTGCT GGCACGTTTG ATCCCTTCGA TCAATTTCCC CCGGCCGAGC
CTGGTGGACG GTGCGGAGCT GACGCGTCCG GCGCAACTGC GCGGCCTGTC GCCGGATCAG
GTGCTGGTGC TGGTCAATGG CAAGCGCCGC CATACATCCG CCTTCGTCAA TCTGGGCGGG
GCGGTCGGAC GCGGTTCGGC ACCTGCCGAC CTGAATGCCA TCCCGCTGTC GGCCATCGAC
CATATCGAAG TCCTGCGCGA CGGTGCGTCG GCACGTTACG GGTCCGATGC CATCGCCGGG
GTGATCAACA TCATTCTCAA AAGCGCCGAC CACGGCGGGT CGATTTCCAG CCAGTACGGC
CAATACAAGA AGGGCGACGG GATCCAGCGC CAGGTGTCGG GCAATACCGG TTTTGCTTTA
GGCGACAATG GCACGTTCAA CCTTTCCGGT GAAGGTGCCA ACAATGACTA CACCAACCGT
GCCGGTGACG ACTTTCGAGC GTCCAGTGTC GGGTCCACCA CTTACGGTCA GCAGGTGTTT
CGCCAGGGCG AGCCACAGAC GCACGAGGGC AAGCTGCAGT ACAACGCTGA ATACAGCTTC
AATGATGCGG CGGAGTTCTA TAGCTTCGGG GGCTACAGCA AGAGGCGTGG CGAAACCGCC
GGATTTTATC GGCCGAGCAA TGCCTCGAAT AACATTGCGG CGATTTATCC CAACGGCTAT
CTGCCGCTGA TCAATGGCAC GCTCGAAGAC ATCTCGCTGG TCGCGGGCCT GCGCGGAGAG
CTGGCGTATG ACTGGCACTA CGACGTGTCC GCCAACTATG GCAAAAACTC CTATGAGCTG
CGCACCAAAA CCATCAACAC CTCATTGGGA CTGAACACGC CGCGCTCGTT CTACAACGGC
ACGCTGACCA ATGATCAGAA GCAACTGAGC CTCGATCTGT CTAGAGAATT CAATACAGCG
TGGTTGCCTT ACCCGGTATC GGTTGCGTTT GGCGCGGAAT ACCTGCGTCA GGGCTATCAG
ATCGAGGCAG GGCAAGCGGA GTCGTATTTC CAGACCGGCA GTTCCGGGCT GGGCGGTTTC
CGTGCGGCGG ATGCCGGCAG TTACTCGCGA CACAACTTCG CCCAGTATCT GGACCTGGAA
ACCAATCTGA CCGAGAAACT GGGCGTGTCG GCGGCCGTTC GCCACGAGGA CTACAGCGAT
TTCGGCTCCA ATGTCAGCGG TTCACTCTCG GCGCGCTACG ATTTCACTCC GCAGGTGGCC
TTGCGAGGCA GCGTATCGAC AGGCTTCCGC GCGCCTTCGC TGGCGCAGCA GAATTTTGCC
TTCACGTCGT CGCAGCTGAT TGGCAACACC CTCCAGGAAG CGGGCACGTT TCCGGCCGGC
AGTAACGTTG CACAACTGTT GGGCGCCGAA GACCTCAAAC CGGAAAAGTC CCGTAACTAC
AGCCTTGGCC TGGTACTCCA GCCGCTGAAC AGCCTGACCT TGACTGCCGA CGTCTATCGC
ATCGACATTC AGGACCGTAT CTCGCTGTCT TCCAATCTGG TGCTCAATGA CACCGCCATC
AATTACCTGC GCAGCAATGG CGTAGGCGAT ATCAACTACA CCAGTGCCCG CTATTTCACC
AACGCCACGG ACACCAGCAC CGATGGCGTC GATCTGGTCG CCAGTTACCG CTATCAGTTC
GACAACGGCG TGCGCTGGAA CAGCACGGTG GGTTACAACT ACAACCACAC CAAAGTCACC
GACGTGAAGG CCAACCCGGC GATTCTCGAT CAGTTGGGGG TGAATCTGGT ACGGGTAGAC
CGCAGGGAAC GCATCGGTTT GCTGGGCGAC ACCACGCCAC AACACAAACT GACACTGGGC
AATGACCTGA CGTTCGGTAA CTGGGCGTTG CACTCCAACC TGGTCCGCTA CGGCGAGTTC
ACCAGCTATC AGGCCGACAA GGTCAACGAC CAGACCTTCA GCGCCGCCTG GCTGCTGGAC
CTGGCGGTCG ACTACAAGCT CAAGAGCTGG GTCTTCACCC TGGGCGGCGA CAACGTCACC
GACAAATACC CGGAGAAGCT CAACGACTTC TCCTCCAGCG GCGGCAACCT GGCCTACAGC
ACGTTCTCAC CCTACGGGTA CAGCGGCGCT TATTACTACG GCAAGGTCAC GTATAACTGG
TAG
 
Protein sequence
MGNFKRSVLA TAIFSANLLS VAGISASAFA AEATDEANTQ GASTLGTVIV TGTRAQERTA 
SASLSPIDVI SGDSLRSSGS SELGTVLARL IPSINFPRPS LVDGAELTRP AQLRGLSPDQ
VLVLVNGKRR HTSAFVNLGG AVGRGSAPAD LNAIPLSAID HIEVLRDGAS ARYGSDAIAG
VINIILKSAD HGGSISSQYG QYKKGDGIQR QVSGNTGFAL GDNGTFNLSG EGANNDYTNR
AGDDFRASSV GSTTYGQQVF RQGEPQTHEG KLQYNAEYSF NDAAEFYSFG GYSKRRGETA
GFYRPSNASN NIAAIYPNGY LPLINGTLED ISLVAGLRGE LAYDWHYDVS ANYGKNSYEL
RTKTINTSLG LNTPRSFYNG TLTNDQKQLS LDLSREFNTA WLPYPVSVAF GAEYLRQGYQ
IEAGQAESYF QTGSSGLGGF RAADAGSYSR HNFAQYLDLE TNLTEKLGVS AAVRHEDYSD
FGSNVSGSLS ARYDFTPQVA LRGSVSTGFR APSLAQQNFA FTSSQLIGNT LQEAGTFPAG
SNVAQLLGAE DLKPEKSRNY SLGLVLQPLN SLTLTADVYR IDIQDRISLS SNLVLNDTAI
NYLRSNGVGD INYTSARYFT NATDTSTDGV DLVASYRYQF DNGVRWNSTV GYNYNHTKVT
DVKANPAILD QLGVNLVRVD RRERIGLLGD TTPQHKLTLG NDLTFGNWAL HSNLVRYGEF
TSYQADKVND QTFSAAWLLD LAVDYKLKSW VFTLGGDNVT DKYPEKLNDF SSSGGNLAYS
TFSPYGYSGA YYYGKVTYNW