Gene Psyr_2289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2289 
Symbol 
ID3367804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2659017 
End bp2659418 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content58% 
IMG OID637652639 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_235370 
Protein GI66045529 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.115279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.86842e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTTTTT CCACGCAAGA CACCGATGAA GTGCTGAGCG AGATCAACGT CACGCCGCTG 
GTAGACGTGA TGCTGGTGCT GCTGGTGGTG TTCATCGTTA CCGCGCCGCT ATTGACAAAC
TCGATCCCGA TCAACCTGCC CAAGACCGAA TCGGTCGCGC CAGTGGAGCA GAAAGACCCA
TTGGTGGTGA GCATCGACGG GCAGGGCAAG CTGTTCATCA ACAAGGACGA AATCCAGCCG
GACTTGCTGG AAAGCAACCT GAAGGCGGCC AGGGACAAGG CCCCTGACGT GCGCGTGCAA
TTGCAGGCGG ACAATGGCGT CAACTACGGG GAAGTCGCGC GCGCCATGGC CTCCATCGAA
CGTGCCGGGA TTACCAAATT GTCGGTAATC ACTGCCAGGT AA
 
Protein sequence
MAFSTQDTDE VLSEINVTPL VDVMLVLLVV FIVTAPLLTN SIPINLPKTE SVAPVEQKDP 
LVVSIDGQGK LFINKDEIQP DLLESNLKAA RDKAPDVRVQ LQADNGVNYG EVARAMASIE
RAGITKLSVI TAR