Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2288 |
Symbol | |
ID | 3367803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2658248 |
End bp | 2659015 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637652638 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_235369 |
Protein GI | 66045528 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.018697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000321635 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCTTGTT CAGACTTTGT TCATAGAGAG AGCTGCGCCA TGAACCTGAT TGCTTCGCCT TTTGAATCCA TCGAACACGC GGTCATCTGG CTGCTGGTCA TTTTTTCCGT CGCGACCTGG GGCCTGGCCC TGCTCAAGGG CGTGCAGTTT TCGCGCCTGA AGTCTCAGGA TCGCAAGTTC CACAAGCAGT TCTGGGCGGC ATCGAGCTTG GATTCAGCCG CGCAACTGGC CCACGAGCAA CCGGGCGCTG CCGCTCGGGT CGCGCTGGCC GGTTACGCCG CCATTCAGGT GGCGGATGGC GCGCAGGCCC ATGACCTCAG TCAGTCCATC AACCATCAGG ACCGCCTTGA GCGCGCCCTG CGTCAGCAGA TCGTCCGCGA GCGCCGCTCG CTGGAAACCG GTCTGGCCAT CCTCGCCAGC ATCGGCAGCA CTTCGCCTTT CATCGGTCTG TTCGGTACGG TCTGGGGCAT CATGTCGGCC CTCAAGGGCA TCAGTGCGGC CGGTTCCGCG AGCCTGGAAA CGGTGGCCGG GCCGATCGGC GCGGCGCTGG TGGCAACCGG TGTCGGCATT GCCGTCGCAG TGCCTGCAGT GCTGGTCTAC AACTACTTTC TGCGACGCCT GAAACTGACG GCTGCCGATC TGGATGACTT TGCCCATGAC TTCTATAGCC TGGCGCAGAA GAGTGCCTTC CGTGTGCTGC TGCATCCGGT ATTGAAGTCC GGCGCTGCAG GCGCACACGC CGGGCAGAAA GTGCAGGAGG CCTCCTGA
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Protein sequence | MPCSDFVHRE SCAMNLIASP FESIEHAVIW LLVIFSVATW GLALLKGVQF SRLKSQDRKF HKQFWAASSL DSAAQLAHEQ PGAAARVALA GYAAIQVADG AQAHDLSQSI NHQDRLERAL RQQIVRERRS LETGLAILAS IGSTSPFIGL FGTVWGIMSA LKGISAAGSA SLETVAGPIG AALVATGVGI AVAVPAVLVY NYFLRRLKLT AADLDDFAHD FYSLAQKSAF RVLLHPVLKS GAAGAHAGQK VQEAS
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