Gene Psyr_2288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2288 
Symbol 
ID3367803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2658248 
End bp2659015 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID637652638 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_235369 
Protein GI66045528 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.018697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.21635e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCTTGTT CAGACTTTGT TCATAGAGAG AGCTGCGCCA TGAACCTGAT TGCTTCGCCT 
TTTGAATCCA TCGAACACGC GGTCATCTGG CTGCTGGTCA TTTTTTCCGT CGCGACCTGG
GGCCTGGCCC TGCTCAAGGG CGTGCAGTTT TCGCGCCTGA AGTCTCAGGA TCGCAAGTTC
CACAAGCAGT TCTGGGCGGC ATCGAGCTTG GATTCAGCCG CGCAACTGGC CCACGAGCAA
CCGGGCGCTG CCGCTCGGGT CGCGCTGGCC GGTTACGCCG CCATTCAGGT GGCGGATGGC
GCGCAGGCCC ATGACCTCAG TCAGTCCATC AACCATCAGG ACCGCCTTGA GCGCGCCCTG
CGTCAGCAGA TCGTCCGCGA GCGCCGCTCG CTGGAAACCG GTCTGGCCAT CCTCGCCAGC
ATCGGCAGCA CTTCGCCTTT CATCGGTCTG TTCGGTACGG TCTGGGGCAT CATGTCGGCC
CTCAAGGGCA TCAGTGCGGC CGGTTCCGCG AGCCTGGAAA CGGTGGCCGG GCCGATCGGC
GCGGCGCTGG TGGCAACCGG TGTCGGCATT GCCGTCGCAG TGCCTGCAGT GCTGGTCTAC
AACTACTTTC TGCGACGCCT GAAACTGACG GCTGCCGATC TGGATGACTT TGCCCATGAC
TTCTATAGCC TGGCGCAGAA GAGTGCCTTC CGTGTGCTGC TGCATCCGGT ATTGAAGTCC
GGCGCTGCAG GCGCACACGC CGGGCAGAAA GTGCAGGAGG CCTCCTGA
 
Protein sequence
MPCSDFVHRE SCAMNLIASP FESIEHAVIW LLVIFSVATW GLALLKGVQF SRLKSQDRKF 
HKQFWAASSL DSAAQLAHEQ PGAAARVALA GYAAIQVADG AQAHDLSQSI NHQDRLERAL
RQQIVRERRS LETGLAILAS IGSTSPFIGL FGTVWGIMSA LKGISAAGSA SLETVAGPIG
AALVATGVGI AVAVPAVLVY NYFLRRLKLT AADLDDFAHD FYSLAQKSAF RVLLHPVLKS
GAAGAHAGQK VQEAS