Gene Psyr_2287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2287 
Symbol 
ID3367802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2657321 
End bp2658154 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content66% 
IMG OID637652637 
ProductTonB, C-terminal 
Protein accessionYP_235368 
Protein GI66045527 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00257812 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.80211e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGCAATG TCCAGACCGC AGCCAGTGCA CATGACGTGC CCTGGCGCCA GACGCCGAGT 
GGCGACCTGG TCGATCTGGG GCGTCCTTTC CGTGCGCCGC TGGCGTTAGC GCGGCTGCAA
AGCACCCCCA AGCCGATTCT GGGGCGGCGC GAAGCCATTT TGCTCGGTGC GCTGGCGCTG
GTGTTCCATG GCGCGATCAT TTACTGGCTG AGCCAGAACC CGACGCCGGC ACTGCCGGTG
GTGCCACCTG AAATTCCGCC GATGACCATC GAGTTTTCCC AGCCTGCGCC ACCGGTTGTG
GAAACACCGC CGCCAACGCC CGAGCCTGTC GTGCAGCCGG TGGTCGAGCC GCCGCCTCCG
GTCGAGGACG AACTGGCAGT CAAACCACCA CCGCCCAAAC CGATTCCCAA GCCCAAGCCA
CAGCCGCCCA AACCGGTGTT CAAGCCAGCT GTAAAACCAG TGGCCAAACC GGTTGAGCAG
CCACCCGCAC CTCCTGTACC TGCAGCCCCT GTCGCCGCGC CTGCGCCACC GGCAGCGCCC
GCACCAAAGC CGGTGACCCC GGCCTCGGCC AGCGCGGGTT ACCTGCGCAA CCCGGCCCCG
GAATACCCAT CGCTGGCCAT GCGTCGTGGC TGGGAAGGCA CTGTGCTGTT GCGCGTACAT
GTATTGGCCA GCGGCAAACC CGGCGAGATT CAGATACAGA AGAGCAGTGG CCGCGACCAG
CTCGACGACG CCGCGCTGGC GGCGGTGAAA CGCTGGAGTT TCGTTCCGGC CAAGCAGGGC
GATGTCGCCC AGGATGGCTG GGTCAGCGTG CCCATTGATT TCAAGATCAA ATGA
 
Protein sequence
MGNVQTAASA HDVPWRQTPS GDLVDLGRPF RAPLALARLQ STPKPILGRR EAILLGALAL 
VFHGAIIYWL SQNPTPALPV VPPEIPPMTI EFSQPAPPVV ETPPPTPEPV VQPVVEPPPP
VEDELAVKPP PPKPIPKPKP QPPKPVFKPA VKPVAKPVEQ PPAPPVPAAP VAAPAPPAAP
APKPVTPASA SAGYLRNPAP EYPSLAMRRG WEGTVLLRVH VLASGKPGEI QIQKSSGRDQ
LDDAALAAVK RWSFVPAKQG DVAQDGWVSV PIDFKIK